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Mir3961 Gene Detail
Summary
  • Symbol
    Mir3961
  • Name
    microRNA 3961
  • Synonyms
    mmu-mir-3961
Location &
Maps
more
  • Sequence Map
    Chr13:82846394-82846452 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 43.68 cM
Strain
Comparison
more
  • SNPs within 2kb
    144 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4950395
 miRNA gene Chr13:82846394-82846452 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008084
 miRNA gene Chr13:83494653-83494711 (-)
A/J MGP_AJ_G0008074
 miRNA gene Chr13:80585191-80585249 (-)
AKR/J MGP_AKRJ_G0008052
 miRNA gene Chr13:83007455-83007513 (-)
BALB/cJ MGP_BALBcJ_G0008055
 miRNA gene Chr13:81143539-81143597 (-)
C3H/HeJ MGP_C3HHeJ_G0008000
 miRNA gene Chr13:82713613-82713671 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008242
 miRNA gene Chr13:86203974-86204032 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007343
 miRNA gene Chr13:77010030-77010088 (-)
CAST/EiJ MGP_CASTEiJ_G0007882
 miRNA gene Chr13:81804157-81804215 (-)
CBA/J MGP_CBAJ_G0007967
 miRNA gene Chr13:89480434-89480492 (-)
DBA/2J MGP_DBA2J_G0008002
 miRNA gene Chr13:80251151-80251209 (-)
FVB/NJ MGP_FVBNJ_G0008025
 miRNA gene Chr13:79310107-79310165 (-)
LP/J MGP_LPJ_G0008085
 miRNA gene Chr13:83747951-83748009 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007996
 miRNA gene Chr13:88539173-88539231 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008240
 miRNA gene Chr13:82381675-82381733 (-)
PWK/PhJ MGP_PWKPhJ_G0007803
 miRNA gene Chr13:79160759-79160817 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007697
 miRNA gene Chr13:78659341-78659399 (-)
WSB/EiJ MGP_WSBEiJ_G0007954
 miRNA gene Chr13:82820300-82820358 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100628621 NCBI Gene Model | MGI Sequence Detail 59 C57BL/6J ±  kb
transcript NR_039537 RefSeq | MGI Sequence Detail 59 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0016965
References
more
  • Summaries
    All 7
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory