Igkv14-118-1 Pseudogene Detail

Summary

• Symbol
  Igkv14-118-1
• Name
  immunoglobulin kappa chain variable 14-118-1

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009879
  NCBI Gene: 692175
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:68059659-68060105 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 31.06 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009879	pseudogenic gene segment	Chr6:68059531-68060129 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0000246	pseudogenic gene segment	Chr6:68270517-68271969 (+)
A/J	MGP_AJ_G0000212	pseudogenic gene segment	Chr6:39699544-39700001 (+)
AKR/J	MGP_AKRJ_G0000215	pseudogenic gene segment	Chr6:40969319-40969776 (+)
BALB/cJ	MGP_BALBcJ_G0000210	pseudogenic gene segment	Chr6:39955636-39956093 (+)
C3H/HeJ	MGP_C3HHeJ_G0000208	pseudogenic gene segment	Chr6:41014710-41015167 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0000322	pseudogenic gene segment	Chr6:69885365-69885811 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0000218	pseudogenic gene segment	Chr6:67627058-67627514 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0000199	pseudogenic gene segment	Chr6:39553925-39554382 (+)
FVB/NJ	MGP_FVBNJ_G0000212	pseudogenic gene segment	Chr6:64415100-64415546 (+)
LP/J	MGP_LPJ_G0000258	pseudogenic gene segment	Chr6:68099498-68099944 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000224	pseudogenic gene segment	Chr6:76514441-76514897 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000306	pseudogenic gene segment	Chr6:67350890-67351346 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0000167	pseudogenic gene segment	Chr6:66775168-66775577 (+)
WSB/EiJ	MGP_WSBEiJ_G0000218	pseudogenic gene segment	Chr6:40938244-40938700 (+)

Homology

• Gene Tree
  Igkv14-118-1
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000106480 (Evidence)
• NCBI Gene
  692175

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106480	Ensembl Gene Model | MGI Sequence Detail	447	C57BL/6J
transcript	ENSMUST00000198645	Ensembl | MGI Sequence Detail	334	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;