Gm17838 Pseudogene Detail

Summary

• Symbol
  Gm17838
• Name
  predicted gene, 17838

• Feature Type
  pseudogene
• IDs
  MGI:5010023
  NCBI Gene: 100415957
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:54892996-54893690 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 33.37 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010023	pseudogene	Chr7:54891885-54893690 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013905	pseudogene	Chr7:56040974-56042779 (-)
A/J	MGP_AJ_G0013924	pseudogene	Chr7:55197468-55199273 (-)
AKR/J	MGP_AKRJ_G0013858	pseudogene	Chr7:56491450-56493255 (-)
BALB/cJ	MGP_BALBcJ_G0013882	pseudogene	Chr7:54807857-54809662 (-)
C3H/HeJ	MGP_C3HHeJ_G0013717	pseudogene	Chr7:56824684-56826489 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014316	pseudogene	Chr7:58603028-58604833 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012169	pseudogene	Chr7:57912700-57914500 (-)
CAST/EiJ	MGP_CASTEiJ_G0013382	pseudogene	Chr7:48105158-48106966 (-)
CBA/J	MGP_CBAJ_G0013699	pseudogene	Chr7:60601603-60603408 (-)
DBA/2J	MGP_DBA2J_G0013778	pseudogene	Chr7:54223165-54224970 (-)
FVB/NJ	MGP_FVBNJ_G0013779	pseudogene	Chr7:54195169-54196974 (-)
LP/J	MGP_LPJ_G0013849	pseudogene	Chr7:57082292-57084097 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013804	pseudogene	Chr7:60061310-60063115 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014273	pseudogene	Chr7:55479505-55481310 (-)
PWK/PhJ	MGP_PWKPhJ_G0013192	pseudogene	Chr7:47506562-47508367 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012959	pseudogene	Chr7:43517310-43519123 (-)
WSB/EiJ	MGP_WSBEiJ_G0013441	pseudogene	Chr7:56138243-56140048 (-)

Homology

• Gene Tree
  Gm17838
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108326 (Evidence)
• NCBI Gene
  100415957

Representative Sequences			Length	Strain/Species
genomic	100415957	NCBI Gene Model | MGI Sequence Detail	695	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;