Gm17852 Pseudogene Detail

Summary

• Symbol
  Gm17852
• Name
  predicted gene, 17852

• Feature Type
  pseudogene
• IDs
  MGI:5010037
  NCBI Gene: 100415981
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:152209571-152211320 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 82.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010037	pseudogene	Chr4:152209571-152211320 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm17852
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  100415981

Representative Sequences			Length	Strain/Species
genomic	100415981	NCBI Gene Model | MGI Sequence Detail	1750	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:121726 Bagchi A, et al., CHD5 is a tumor suppressor at human 1p36. Cell. 2007 Feb 9;128(3):459-75
• Latest
  J:196071 van der Weyden L, et al., Cancer of mice and men: old twists and new tails. J Pathol. 2013 May;230(1):4-16

TSS for Gm17852:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr44808	Chr4:152210449-152210458 (-)	866 bp