Gm17877 Pseudogene Detail

Summary

• Symbol
  Gm17877
• Name
  predicted gene, 17877

• Feature Type
  pseudogene
• IDs
  MGI:5010062
  NCBI Gene: 100416024
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:10036248-10037061 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 2.47 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010062	pseudogene	Chr3:10035563-10037070 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012020	pseudogene	Chr3:6916814-6917627 (-)
A/J	MGP_AJ_G0012011	pseudogene	Chr3:7074313-7075126 (-)
AKR/J	MGP_AKRJ_G0011972	pseudogene	Chr3:6985662-6986475 (-)
BALB/cJ	MGP_BALBcJ_G0011989	pseudogene	Chr3:6793940-6794753 (-)
C3H/HeJ	MGP_C3HHeJ_G0011866	pseudogene	Chr3:7288592-7289405 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012294	pseudogene	Chr3:7551673-7552486 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011649	pseudogene	Chr3:7314417-7315230 (-)
CBA/J	MGP_CBAJ_G0011839	pseudogene	Chr3:7542661-7543474 (-)
DBA/2J	MGP_DBA2J_G0011893	pseudogene	Chr3:6647204-6648017 (-)
FVB/NJ	MGP_FVBNJ_G0011901	pseudogene	Chr3:6585354-6586167 (-)
LP/J	MGP_LPJ_G0011967	pseudogene	Chr3:7435893-7436706 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011903	pseudogene	Chr3:8582559-8583372 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012301	pseudogene	Chr3:6851987-6852800 (-)
PWK/PhJ	MGP_PWKPhJ_G0011496	pseudogene	Chr3:6892002-6892812 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011312	pseudogene	Chr3:6968861-6969675 (-)
WSB/EiJ	MGP_WSBEiJ_G0011670	pseudogene	Chr3:6822955-6823768 (-)

Homology

• Gene Tree
  Gm17877
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000103698 (Evidence)
• NCBI Gene
  100416024

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103698	Ensembl Gene Model | MGI Sequence Detail	814	C57BL/6J
transcript	ENSMUST00000192578	Ensembl | MGI Sequence Detail	814	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;