Gm17906 Pseudogene Detail

Summary

• Symbol
  Gm17906
• Name
  predicted gene, 17906

• Feature Type
  pseudogene
• IDs
  MGI:5010091
  NCBI Gene: 100416075
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:75043999-75044776 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 39.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  187 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010091	pseudogene	Chr5:75043996-75044896 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013137	pseudogene	Chr5:74988188-74989088 (+)
A/J	MGP_AJ_G0013120	pseudogene	Chr5:72135625-72136563 (+)
AKR/J	MGP_AKRJ_G0013086	pseudogene	Chr5:74496847-74497747 (+)
BALB/cJ	MGP_BALBcJ_G0013101	pseudogene	Chr5:72848679-72849579 (+)
C3H/HeJ	MGP_C3HHeJ_G0012947	pseudogene	Chr5:74877032-74877932 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013461	pseudogene	Chr5:78015549-78016449 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012682	pseudogene	Chr5:73990414-73991358 (+)
CBA/J	MGP_CBAJ_G0012919	pseudogene	Chr5:80594672-80595572 (+)
DBA/2J	MGP_DBA2J_G0012998	pseudogene	Chr5:72221514-72222414 (+)
FVB/NJ	MGP_FVBNJ_G0013001	pseudogene	Chr5:71369611-71370549 (+)
LP/J	MGP_LPJ_G0013072	pseudogene	Chr5:75420272-75421172 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013019	pseudogene	Chr5:83810241-83811141 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013463	pseudogene	Chr5:74023796-74024696 (+)
PWK/PhJ	MGP_PWKPhJ_G0012502	pseudogene	Chr5:71209427-71210530 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012302	pseudogene	Chr5:73372229-73373279 (+)
WSB/EiJ	MGP_WSBEiJ_G0012719	pseudogene	Chr5:74316496-74317396 (+)

Homology

• Gene Tree
  Gm17906
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  345 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Spontaneous
  3
• Genomic Mutations
  5 involving Gm17906
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000106806 (Evidence)
• NCBI Gene
  100416075

Representative Sequences			Length	Strain/Species
genomic	100416075	NCBI Gene Model | MGI Sequence Detail	778	C57BL/6J

References

• Summaries
  All 348

  Diseases 1

  Phenotypes 345
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:353367 Taketomi Y, et al., Lipid-orchestrated paracrine circuit coordinates mast cell maturation and anaphylaxis through functional interaction with fibroblasts. Immunity. 2024 Aug 13;57(8):1828-1847.e11