Gm17956 Pseudogene Detail

Summary

• Symbol
  Gm17956
• Name
  predicted gene, 17956

• Feature Type
  pseudogene
• IDs
  MGI:5010141
  NCBI Gene: 100416171
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:104036763-104037569 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 45.52 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010141	pseudogene	Chr3:104036740-104037577 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012331	pseudogene	Chr3:105425353-105426190 (+)
A/J	MGP_AJ_G0012325	pseudogene	Chr3:102074332-102075169 (+)
AKR/J	MGP_AKRJ_G0012291	pseudogene	Chr3:104569158-104569995 (+)
BALB/cJ	MGP_BALBcJ_G0012308	pseudogene	Chr3:101849586-101850423 (+)
C3H/HeJ	MGP_C3HHeJ_G0012172	pseudogene	Chr3:104947395-104948232 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012621	pseudogene	Chr3:109340252-109341089 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011000	pseudogene	Chr3:98209502-98210317 (+)
CAST/EiJ	MGP_CASTEiJ_G0011943	pseudogene	Chr3:104056315-104057152 (+)
CBA/J	MGP_CBAJ_G0012151	pseudogene	Chr3:113084647-113085484 (+)
DBA/2J	MGP_DBA2J_G0012207	pseudogene	Chr3:101322067-101322904 (+)
FVB/NJ	MGP_FVBNJ_G0012211	pseudogene	Chr3:99254292-99255129 (+)
LP/J	MGP_LPJ_G0012277	pseudogene	Chr3:106776222-106777059 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012213	pseudogene	Chr3:119215875-119216712 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012627	pseudogene	Chr3:104125029-104125866 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0011601	pseudogene	Chr3:102194215-102195042 (+)
WSB/EiJ	MGP_WSBEiJ_G0011974	pseudogene	Chr3:104692981-104693818 (+)

Homology

• Gene Tree
  Gm17956
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm17956
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000105793 (Evidence)
• NCBI Gene
  100416171

Representative Sequences			Length	Strain/Species
genomic	100416171	NCBI Gene Model | MGI Sequence Detail	807	C57BL/6J

References

• Summaries
  All 7

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426