Gm17983 Pseudogene Detail

Summary

• Symbol
  Gm17983
• Name
  predicted gene, 17983

• Feature Type
  pseudogene
• IDs
  MGI:5010168
  NCBI Gene: 100416227
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:39232589-39233166 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 25.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  185 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010168	pseudogene	Chr7:39232589-39233182 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013872	pseudogene	Chr7:39208091-39208684 (-)
A/J	MGP_AJ_G0013890	pseudogene	Chr7:38288256-38288849 (-)
AKR/J	MGP_AKRJ_G0013826	pseudogene	Chr7:39408239-39408832 (-)
BALB/cJ	MGP_BALBcJ_G0013854	pseudogene	Chr7:38533573-38534166 (-)
C3H/HeJ	MGP_C3HHeJ_G0013683	pseudogene	Chr7:40049240-40049833 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014271	pseudogene	Chr7:41139329-41139922 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013350	pseudogene	Chr7:31164892-31165485 (-)
CBA/J	MGP_CBAJ_G0013661	pseudogene	Chr7:42427822-42428415 (-)
DBA/2J	MGP_DBA2J_G0013746	pseudogene	Chr7:38206540-38207133 (-)
FVB/NJ	MGP_FVBNJ_G0013736	pseudogene	Chr7:37972928-37973521 (-)
LP/J	MGP_LPJ_G0013818	pseudogene	Chr7:39591310-39591903 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013762	pseudogene	Chr7:41248927-41249520 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014237	pseudogene	Chr7:38761247-38761840 (-)
PWK/PhJ	MGP_PWKPhJ_G0013163	pseudogene	Chr7:31221442-31222035 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012934	pseudogene	Chr7:27498923-27499503 (-)
WSB/EiJ	MGP_WSBEiJ_G0013407	pseudogene	Chr7:39198700-39199293 (-)

Homology

• Gene Tree
  Gm17983
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000099934 (Evidence)
• NCBI Gene
  100416227

Representative Sequences			Length	Strain/Species
genomic	100416227	NCBI Gene Model | MGI Sequence Detail	578	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;