Gm18127 Pseudogene Detail

Summary

• Symbol
  Gm18127
• Name
  predicted gene, 18127

• Feature Type
  pseudogene
• IDs
  MGI:5010312
  NCBI Gene: 100416464
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:57549697-57550395 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 33.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  228 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010312	pseudogene	Chr7:57549697-57550435 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm18127
  

Human Diseases

• References
  5 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  33 phenotype references
  

• All Mutations and Alleles
  4
• Radiation induced
  1
• Targeted
  2
• Transgenic
  1
• Genomic Mutations
  4 involving Gm18127
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• Ensembl
  ENSMUSG00000109339 (Evidence)
• NCBI Gene
  100416464

Representative Sequences			Length	Strain/Species
genomic	100416464	NCBI Gene Model | MGI Sequence Detail	699	C57BL/6J

References

• Summaries
  All 36

  Diseases 5

  Phenotypes 33
• Earliest
  J:56614 Gabriel JM, et al., A transgene insertion creating a heritable chromosome deletion mouse model of Prader-Willi and angelman syndromes. Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):9258-63
• Latest
  J:335224 Nakai N, et al., Virtual reality-based real-time imaging reveals abnormal cortical dynamics during behavioral transitions in a mouse model of autism. Cell Rep. 2023 Mar 24;:112258