Gm18427 Pseudogene Detail

Summary

• Symbol
  Gm18427
• Name
  predicted gene, 18427

• Feature Type
  pseudogene
• IDs
  MGI:5010612
  NCBI Gene: 100417154
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:59927776-59928290 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 29.17 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010612	pseudogene	Chr3:59927776-59928290 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012173	pseudogene	Chr3:58893822-58894336 (-)
A/J	MGP_AJ_G0012166	pseudogene	Chr3:57183235-57183749 (-)
AKR/J	MGP_AKRJ_G0012131	pseudogene	Chr3:58295088-58295602 (-)
BALB/cJ	MGP_BALBcJ_G0012146	pseudogene	Chr3:56918393-56918907 (-)
C3H/HeJ	MGP_C3HHeJ_G0012021	pseudogene	Chr3:58492915-58493429 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012456	pseudogene	Chr3:61097432-61097946 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010868	pseudogene	Chr3:53325672-53326186 (-)
CAST/EiJ	MGP_CASTEiJ_G0011799	pseudogene	Chr3:58674088-58674602 (-)
CBA/J	MGP_CBAJ_G0011995	pseudogene	Chr3:63138763-63139277 (-)
DBA/2J	MGP_DBA2J_G0012052	pseudogene	Chr3:56616556-56617070 (-)
FVB/NJ	MGP_FVBNJ_G0012055	pseudogene	Chr3:55521079-55521593 (-)
LP/J	MGP_LPJ_G0012120	pseudogene	Chr3:59722717-59723231 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012058	pseudogene	Chr3:67281548-67282062 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012464	pseudogene	Chr3:58214816-58215330 (-)
PWK/PhJ	MGP_PWKPhJ_G0011643	pseudogene	Chr3:56244362-56244876 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011458	pseudogene	Chr3:57820968-57821482 (-)
WSB/EiJ	MGP_WSBEiJ_G0011830	pseudogene	Chr3:58335866-58336380 (-)

Homology

• Gene Tree
  Gm18427
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm18427
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000103177 (Evidence)
• NCBI Gene
  100417154

Representative Sequences			Length	Strain/Species
genomic	100417154	NCBI Gene Model | MGI Sequence Detail	515	C57BL/6J

References

• Summaries
  All 5

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426