Gm18451 Pseudogene Detail

Summary

• Symbol
  Gm18451
• Name
  predicted gene, 18451

• Feature Type
  pseudogene
• IDs
  MGI:5010636
  NCBI Gene: 100417207
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:54727247-54735354 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 29.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  280 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010636	pseudogene	Chr5:54727247-54735413 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013086	pseudogene	Chr5:53667544-53679341 (+)
A/J	MGP_AJ_G0013071	pseudogene	Chr5:51766654-51774483 (+)
AKR/J	MGP_AKRJ_G0013036	pseudogene	Chr5:53537273-53548330 (+)
BALB/cJ	MGP_BALBcJ_G0013049	pseudogene	Chr5:52254859-52265344 (+)
C3H/HeJ	MGP_C3HHeJ_G0012900	pseudogene	Chr5:53709256-53725029 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013409	pseudogene	Chr5:55847641-55860568 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011600	pseudogene	Chr5:48471484-48479450 (+)
CAST/EiJ	MGP_CASTEiJ_G0012633	pseudogene	Chr5:52694601-52702846 (+)
CBA/J	MGP_CBAJ_G0012868	pseudogene	Chr5:57617251-57626264 (+)
DBA/2J	MGP_DBA2J_G0012945	pseudogene	Chr5:51815516-51824149 (+)
FVB/NJ	MGP_FVBNJ_G0012952	pseudogene	Chr5:51142279-51150063 (+)
LP/J	MGP_LPJ_G0013020	pseudogene	Chr5:54116204-54125621 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012968	pseudogene	Chr5:58630789-58641709 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013411	pseudogene	Chr5:53039828-53050048 (+)
PWK/PhJ	MGP_PWKPhJ_G0012451	pseudogene	Chr5:50897560-50905817 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012668	pseudogene	Chr5:53093166-53104031 (+)

Homology

• Gene Tree
  Gm18451
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm18451
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000106529 (Evidence)
• NCBI Gene
  100417207

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106529	Ensembl Gene Model | MGI Sequence Detail	8108	C57BL/6J
transcript	ENSMUST00000196759	Ensembl | MGI Sequence Detail	1719	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17