Gm18594 Pseudogene Detail

Summary

• Symbol
  Gm18594
• Name
  predicted gene, 18594

• Feature Type
  pseudogene
• IDs
  MGI:5010779
  NCBI Gene: 100417407
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:108969587-108970989 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 53.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  194 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010779	pseudogene	Chr5:108969587-108970989 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013225	pseudogene	Chr5:110961295-110962697 (+)
A/J	MGP_AJ_G0013206	pseudogene	Chr5:106689352-106690754 (+)
AKR/J	MGP_AKRJ_G0013173	pseudogene	Chr5:110135347-110136749 (+)
BALB/cJ	MGP_BALBcJ_G0013186	pseudogene	Chr5:107830707-107832109 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0013552	pseudogene	Chr5:115491167-115492569 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012766	pseudogene	Chr5:109644699-109646096 (+)
CBA/J	MGP_CBAJ_G0013004	pseudogene	Chr5:119402858-119404260 (+)
DBA/2J	MGP_DBA2J_G0013087	pseudogene	Chr5:106814474-106815876 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0013158	pseudogene	Chr5:111553715-111555117 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013105	pseudogene	Chr5:124284625-124286027 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013554	pseudogene	Chr5:109671521-109672923 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0010740	pseudogene	Chr17:53579005-53580414 (+)
WSB/EiJ	MGP_WSBEiJ_G0012798	pseudogene	Chr5:110004807-110006209 (+)

Homology

• Gene Tree
  Gm18594
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18594
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000093756 (Evidence)
• NCBI Gene
  100417407

Representative Sequences			Length	Strain/Species
genomic	100417407	NCBI Gene Model | MGI Sequence Detail	1403	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17