Gm18689 Pseudogene Detail

Summary

• Symbol
  Gm18689
• Name
  predicted gene, 18689

• Feature Type
  pseudogene
• IDs
  MGI:5010874
  NCBI Gene: 100417561
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:132978711-132979612 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 64.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010874	pseudogene	Chr6:132978703-132979613 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040487	pseudogene	Chr6:136934657-136935558 (+)
A/J	MGP_AJ_G0040470	pseudogene	Chr6:131504062-131504964 (+)
AKR/J	MGP_AKRJ_G0040398	pseudogene	Chr6:135444512-135445414 (+)
BALB/cJ	MGP_BALBcJ_G0040476	pseudogene	Chr6:131325793-131326695 (-)
C3H/HeJ	MGP_C3HHeJ_G0040098	pseudogene	Chr6:135609240-135610142 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041100	pseudogene	Chr6:140817977-140818878 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037401	pseudogene	Chr6:130031781-130032711 (-)
CAST/EiJ	MGP_CASTEiJ_G0039164	pseudogene	Chr6:135426492-135427394 (-)
CBA/J	MGP_CBAJ_G0040070	pseudogene	Chr6:146097472-146098374 (-)
DBA/2J	MGP_DBA2J_G0040273	pseudogene	Chr6:130562714-130563616 (-)
FVB/NJ	MGP_FVBNJ_G0040217	pseudogene	Chr6:129340860-129341761 (+)
LP/J	MGP_LPJ_G0040314	pseudogene	Chr6:137250004-137250906 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040210	pseudogene	Chr6:149923063-149923964 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041174	pseudogene	Chr6:135560129-135561030 (-)
PWK/PhJ	MGP_PWKPhJ_G0038843	pseudogene	Chr6:128988143-128989045 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038550	pseudogene	Chr6:133970800-133971738 (-)
WSB/EiJ	MGP_WSBEiJ_G0039403	pseudogene	Chr6:135966246-135967147 (+)

Homology

• Gene Tree
  Gm18689
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107808 (Evidence)
• NCBI Gene
  100417561

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107808	Ensembl Gene Model | MGI Sequence Detail	902	C57BL/6J
transcript	ENSMUST00000203969	Ensembl | MGI Sequence Detail	902	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;