Gm18690 Pseudogene Detail

Summary

• Symbol
  Gm18690
• Name
  predicted gene, 18690

• Feature Type
  pseudogene
• IDs
  MGI:5010875
  NCBI Gene: 100417562
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:132994357-132995341 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 64.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010875	pseudogene	Chr6:132994357-132995341 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040491	pseudogene	Chr6:137178515-137179607 (-)
A/J	MGP_AJ_G0040474	pseudogene	Chr6:131713666-131714658 (-)
AKR/J	MGP_AKRJ_G0040397	pseudogene	Chr6:135428180-135429172 (+)
BALB/cJ	MGP_BALBcJ_G0040478	pseudogene	Chr6:131349537-131350529 (-)
C3H/HeJ	MGP_C3HHeJ_G0040097	pseudogene	Chr6:135588992-135589984 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041096	pseudogene	Chr6:140613259-140614243 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039160	pseudogene	Chr6:135255700-135256682 (+)
CBA/J	MGP_CBAJ_G0040071	pseudogene	Chr6:146127944-146128936 (-)
DBA/2J	MGP_DBA2J_G0040274	pseudogene	Chr6:130577201-130578193 (-)
FVB/NJ	MGP_FVBNJ_G0040221	pseudogene	Chr6:129591592-129592748 (-)
LP/J	MGP_LPJ_G0040316	pseudogene	Chr6:137265891-137266883 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040209	pseudogene	Chr6:149865461-149866414 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041171	pseudogene	Chr6:135375457-135376439 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0038547	pseudogene	Chr6:133790131-133791124 (+)
WSB/EiJ	MGP_WSBEiJ_G0039402	pseudogene	Chr6:135947875-135948867 (+)

Homology

• Gene Tree
  Gm18690
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000107746 (Evidence)
• NCBI Gene
  100417562

Representative Sequences			Length	Strain/Species
genomic	100417562	NCBI Gene Model | MGI Sequence Detail	985	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;