Gm18734 Pseudogene Detail

Summary

• Symbol
  Gm18734
• Name
  predicted gene, 18734

• Feature Type
  pseudogene
• IDs
  MGI:5010919
  NCBI Gene: 100417645
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:35523182-35525293 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 18.62 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010919	pseudogene	Chr17:35522982-35525294 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040162	pseudogene	Chr17:35464904-35467015 (-)
A/J	MGP_AJ_G0040104	pseudogene	Chr16:38031500-38033545 (-)
AKR/J	MGP_AKRJ_G0040076	pseudogene	Chr17:34745099-34747227 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0039786	pseudogene	Chr17:35165439-35167550 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040730	pseudogene	Chr17:36824887-36827382 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037185	pseudogene	Chr17:30289076-30291179 (+)
CAST/EiJ	MGP_CASTEiJ_G0038876	pseudogene	Chr17:35310154-35334458 (-)
CBA/J	MGP_CBAJ_G0039751	pseudogene	Chr17:38491859-38493970 (-)
DBA/2J	MGP_DBA2J_G0039948	pseudogene	Chr17:33667021-33669826 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0039993	pseudogene	Chr17:35791609-35793720 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039898	pseudogene	Chr17:37250394-37252505 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040829	pseudogene	Chr17:35022446-35031654 (-)
PWK/PhJ	MGP_PWKPhJ_G0038556	pseudogene	Chr17:31043249-31048646 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038271	pseudogene	Chr17:33015739-33018154 (-)
WSB/EiJ	MGP_WSBEiJ_G0039098	pseudogene	Chr17:35164059-35166169 (-)

Homology

• Gene Tree
  Gm18734
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm18734
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000092438 (Evidence)
• NCBI Gene
  100417645

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092438	Ensembl Gene Model | MGI Sequence Detail	2112	C57BL/6J
transcript	ENSMUST00000172937	Ensembl | MGI Sequence Detail	808	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53