Gm18861 Pseudogene Detail

Summary

• Symbol
  Gm18861
• Name
  predicted gene, 18861

• Feature Type
  pseudogene
• IDs
  MGI:5011046
  NCBI Gene: 100417850
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:22759398-22760583 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 9.78 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011046	pseudogene	Chr6:22759398-22761585 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013389	pseudogene	Chr6:20267596-20268781 (+)
A/J	MGP_AJ_G0013372	pseudogene	Chr6:19438933-19440118 (+)
AKR/J	MGP_AKRJ_G0013332	pseudogene	Chr6:20065961-20067146 (+)
BALB/cJ	MGP_BALBcJ_G0013350	pseudogene	Chr6:19523253-19524438 (+)
C3H/HeJ	MGP_C3HHeJ_G0013198	pseudogene	Chr6:20013900-20015085 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013724	pseudogene	Chr6:20889318-20890503 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011836	pseudogene	Chr6:18015806-18017193 (+)
CAST/EiJ	MGP_CASTEiJ_G0012911	pseudogene	Chr6:19929088-19930273 (+)
CBA/J	MGP_CBAJ_G0013168	pseudogene	Chr6:21615006-21616191 (+)
DBA/2J	MGP_DBA2J_G0013252	pseudogene	Chr6:19350682-19351867 (+)
FVB/NJ	MGP_FVBNJ_G0013249	pseudogene	Chr6:19131479-19132664 (+)
LP/J	MGP_LPJ_G0013320	pseudogene	Chr6:20405409-20406594 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013266	pseudogene	Chr6:23442348-23443533 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0012724	pseudogene	Chr6:18968561-18969746 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012506	pseudogene	Chr6:19748313-19749504 (+)
WSB/EiJ	MGP_WSBEiJ_G0012953	pseudogene	Chr6:19917026-19918209 (+)

Homology

• Gene Tree
  Gm18861
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000107303 (Evidence)
• NCBI Gene
  100417850

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107303	Ensembl Gene Model | MGI Sequence Detail	1186	C57BL/6J
transcript	ENSMUST00000202509	Ensembl | MGI Sequence Detail	1186	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;