Gm18956 Pseudogene Detail

Summary

• Symbol
  Gm18956
• Name
  predicted gene, 18956

• Feature Type
  pseudogene
• IDs
  MGI:5011141
  NCBI Gene: 100418032
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:3322980-3323459 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 1.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011141	pseudogene	Chr1:3322957-3323459 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0009955	pseudogene	Chr1:242372-242851 (+)
A/J	MGP_AJ_G0009936	pseudogene	Chr1:330644-331123 (+)
AKR/J	MGP_AKRJ_G0009919	pseudogene	Chr1:246093-246572 (+)
BALB/cJ	MGP_BALBcJ_G0009924	pseudogene	Chr1:281357-281836 (+)
C3H/HeJ	MGP_C3HHeJ_G0009852	pseudogene	Chr1:288959-289436 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010169	pseudogene	Chr1:278553-279032 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008961	pseudogene	Chr1:175947-176435 (+)
CAST/EiJ	MGP_CASTEiJ_G0009708	pseudogene	Chr1:449832-450312 (+)
CBA/J	MGP_CBAJ_G0009828	pseudogene	Chr1:317873-318350 (+)
DBA/2J	MGP_DBA2J_G0009853	pseudogene	Chr1:275189-275669 (+)
FVB/NJ	MGP_FVBNJ_G0009880	pseudogene	Chr1:272181-272660 (+)
LP/J	MGP_LPJ_G0009949	pseudogene	Chr1:419657-420136 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009839	pseudogene	Chr1:387632-388111 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010147	pseudogene	Chr1:259351-259830 (+)
PWK/PhJ	MGP_PWKPhJ_G0009615	pseudogene	Chr1:229777-230257 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009432	pseudogene	Chr1:429681-430161 (+)
WSB/EiJ	MGP_WSBEiJ_G0009773	pseudogene	Chr1:275667-276146 (+)

Homology

• Gene Tree
  Gm18956
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000102851 (Evidence)
• NCBI Gene
  100418032

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102851	Ensembl Gene Model | MGI Sequence Detail	480	C57BL/6J
transcript	ENSMUST00000192857	Ensembl | MGI Sequence Detail	480	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;