Gm18995 Pseudogene Detail

Summary

• Symbol
  Gm18995
• Name
  predicted gene, 18995

• Feature Type
  pseudogene
• IDs
  MGI:5011180
  NCBI Gene: 100418095
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:127144538-127145057 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 61.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011180	pseudogene	Chr6:127144538-127145075 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013706	pseudogene	Chr6:130651181-130651700 (+)
A/J	MGP_AJ_G0013692	pseudogene	Chr6:125689807-125690326 (+)
AKR/J	MGP_AKRJ_G0013654	pseudogene	Chr6:129089545-129090064 (+)
BALB/cJ	MGP_BALBcJ_G0013671	pseudogene	Chr6:125245832-125246351 (+)
C3H/HeJ	MGP_C3HHeJ_G0013515	pseudogene	Chr6:129210854-129211373 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014057	pseudogene	Chr6:134061459-134061978 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012043	pseudogene	Chr6:122863528-122864024 (+)
CAST/EiJ	MGP_CASTEiJ_G0013203	pseudogene	Chr6:129413462-129413981 (+)
CBA/J	MGP_CBAJ_G0013486	pseudogene	Chr6:139218905-139219424 (+)
DBA/2J	MGP_DBA2J_G0013566	pseudogene	Chr6:124576730-124577249 (+)
FVB/NJ	MGP_FVBNJ_G0013565	pseudogene	Chr6:123503407-123503926 (+)
LP/J	MGP_LPJ_G0013647	pseudogene	Chr6:130763829-130764348 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013579	pseudogene	Chr6:143169856-143170375 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014052	pseudogene	Chr6:129043001-129043520 (+)
PWK/PhJ	MGP_PWKPhJ_G0013009	pseudogene	Chr6:122848675-122849194 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012790	pseudogene	Chr6:127123271-127123769 (+)
WSB/EiJ	MGP_WSBEiJ_G0013258	pseudogene	Chr6:129405614-129406133 (+)

Homology

• Gene Tree
  Gm18995
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107378 (Evidence)
• NCBI Gene
  100418095

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107378	Ensembl Gene Model | MGI Sequence Detail	520	C57BL/6J
transcript	ENSMUST00000202981	Ensembl | MGI Sequence Detail	520	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;