Gm19060 Pseudogene Detail

Summary

• Symbol
  Gm19060
• Name
  predicted gene, 19060

• Feature Type
  pseudogene
• IDs
  MGI:5011245
  NCBI Gene: 100418183
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:77375225-77375797 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 41.56 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011245	pseudogene	Chr5:77375131-77375799 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013147	pseudogene	Chr5:77482925-77483497 (+)
A/J	MGP_AJ_G0013130	pseudogene	Chr5:74497083-74497655 (+)
AKR/J	MGP_AKRJ_G0013096	pseudogene	Chr5:76944692-76945264 (+)
BALB/cJ	MGP_BALBcJ_G0013111	pseudogene	Chr5:75237015-75237587 (+)
C3H/HeJ	MGP_C3HHeJ_G0012957	pseudogene	Chr5:77301640-77302212 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013470	pseudogene	Chr5:80568144-80568716 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011648	pseudogene	Chr5:70115219-70115772 (+)
CAST/EiJ	MGP_CASTEiJ_G0012690	pseudogene	Chr5:76528926-76529497 (+)
CBA/J	MGP_CBAJ_G0012929	pseudogene	Chr5:83233580-83234152 (+)
DBA/2J	MGP_DBA2J_G0013008	pseudogene	Chr5:74556600-74557172 (+)
FVB/NJ	MGP_FVBNJ_G0013011	pseudogene	Chr5:73761593-73762165 (+)
LP/J	MGP_LPJ_G0013081	pseudogene	Chr5:77898473-77899045 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013030	pseudogene	Chr5:86336785-86337357 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013473	pseudogene	Chr5:76491263-76491835 (+)
PWK/PhJ	MGP_PWKPhJ_G0012510	pseudogene	Chr5:73578869-73579426 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012309	pseudogene	Chr5:75859981-75860565 (+)
WSB/EiJ	MGP_WSBEiJ_G0012727	pseudogene	Chr5:76815069-76815635 (+)

Homology

• Gene Tree
  Gm19060
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm19060
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107034 (Evidence)
• NCBI Gene
  100418183

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107034	Ensembl Gene Model | MGI Sequence Detail	573	C57BL/6J
transcript	ENSMUST00000201959	Ensembl | MGI Sequence Detail	421	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17