Gm19065 Pseudogene Detail

Summary

• Symbol
  Gm19065
• Name
  predicted gene, 19065

• Feature Type
  pseudogene
• IDs
  MGI:5011250
  NCBI Gene: 100418191
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:128185234-128186252 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 62.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011250	pseudogene	Chr6:128185082-128186252 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039743	pseudogene	Chr6:131793989-131795153 (+)
A/J	MGP_AJ_G0039743	pseudogene	Chr6:126752086-126753250 (+)
AKR/J	MGP_AKRJ_G0039668	pseudogene	Chr6:130165953-130167117 (+)
BALB/cJ	MGP_BALBcJ_G0039712	pseudogene	Chr6:126316345-126317509 (+)
C3H/HeJ	MGP_C3HHeJ_G0039374	pseudogene	Chr6:130300100-130301279 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0036900	pseudogene	Chr6:123952618-123953860 (+)
CAST/EiJ	MGP_CASTEiJ_G0038500	pseudogene	Chr9:117156-118324 (-)
CBA/J	MGP_CBAJ_G0039346	pseudogene	Chr6:140412844-140414008 (+)
DBA/2J	MGP_DBA2J_G0039539	pseudogene	Chr6:125643115-125644279 (+)
FVB/NJ	MGP_FVBNJ_G0039497	pseudogene	Chr6:124561760-124562924 (+)
LP/J	MGP_LPJ_G0039578	pseudogene	Chr6:131904737-131905901 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039417	pseudogene	Chr12:105995053-105996217 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040375	pseudogene	Chr6:130170416-130171580 (+)
PWK/PhJ	MGP_PWKPhJ_G0038167	pseudogene	Chr6:123925493-123926661 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038726	pseudogene	Chr6:130520772-130557550 (+)

Homology

• Gene Tree
  Gm19065
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000107873 (Evidence)
• NCBI Gene
  100418191

Representative Sequences			Length	Strain/Species
genomic	100418191	NCBI Gene Model | MGI Sequence Detail	1019	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;