Gm19265 Gene Detail

Summary

• Symbol
  Gm19265
• Name
  predicted gene, 19265

• Feature Type
  lncRNA gene
• IDs
  MGI:5011450
  NCBI Gene: 118567396
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:85938678-85946535 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 37.55 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  269 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011450	lncRNA gene	Chr6:85938605-85978908 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004304	antisense lncRNA gene	Chr6:87207487-87253118 (+)
A/J	MGP_AJ_G0004282	antisense lncRNA gene	Chr6:83853235-83893985 (+)
AKR/J	MGP_AKRJ_G0004264	antisense lncRNA gene	Chr6:86286587-86327536 (+)
BALB/cJ	MGP_BALBcJ_G0004268	antisense lncRNA gene	Chr6:83844558-83896353 (+)
C3H/HeJ	MGP_C3HHeJ_G0004237	antisense lncRNA gene	Chr6:98139959-98184844 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004417	antisense lncRNA gene	Chr6:89584047-89638071 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0004178	antisense lncRNA gene	Chr6:86328187-86375406 (+)
CBA/J	MGP_CBAJ_G0004210	antisense lncRNA gene	Chr6:93106564-93155491 (+)
DBA/2J	MGP_DBA2J_G0004226	antisense lncRNA gene	Chr6:83173512-83213102 (+)
FVB/NJ	MGP_FVBNJ_G0004242	antisense lncRNA gene	Chr6:82346937-82389298 (+)
LP/J	MGP_LPJ_G0004305	antisense lncRNA gene	Chr6:87248399-87291021 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004233	antisense lncRNA gene	Chr6:97259688-97305689 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004415	antisense lncRNA gene	Chr6:86119257-86169162 (+)
PWK/PhJ	MGP_PWKPhJ_G0004131	antisense lncRNA gene	Chr6:82103690-82147178 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0004215	antisense lncRNA gene	Chr6:86566721-86610749 (+)

Homology

• Gene Tree
  Gm19265
  

Expression

• Assay Results
  706
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000107230 (Evidence)
• NCBI Gene
  118567396

Representative Sequences			Length	Strain/Species
genomic	118567396	NCBI Gene Model | MGI Sequence Detail	7858	C57BL/6J
transcript	XR_004933691	RefSeq | MGI Sequence Detail	4238	C57BL/6J

References

• Summaries
  All 4

  Developmental Gene Expression 1
• Earliest
  J:331893 Yang J, et al., Identifying key m(6)A-methylated lncRNAs and genes associated with neural tube defects via integrative MeRIP and RNA sequencing analyses. Front Genet. 2022;13:974357

TSS for Gm19265:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr57433	Chr6:85938697-85938742 (+)	42 bp