Gm19791 Pseudogene Detail

Summary

• Symbol
  Gm19791
• Name
  predicted gene, 19791

• Feature Type
  pseudogene
• IDs
  MGI:5011976
  NCBI Gene: 108167767
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:21986520-21989244 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 9.85 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011976	pseudogene	Chr10:21983039-21989250 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039945	pseudogene	Chr10:19930904-19934212 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0039929	pseudogene	Chr10:19254514-19257533 (-)
C3H/HeJ	MGP_C3HHeJ_G0039578	pseudogene	Chr10:19873519-19876431 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040505	pseudogene	Chr10:20459413-20469135 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039545	pseudogene	Chr10:21394934-21402710 (+)
DBA/2J	MGP_DBA2J_G0039743	pseudogene	Chr10:19085710-19088445 (+)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0039693	pseudogene	Chr10:21559657-21563543 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040597	pseudogene	Chr10:19529847-19534191 (+)
PWK/PhJ	MGP_PWKPhJ_G0038361	pseudogene	Chr10:19035050-19037770 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038094	pseudogene	Chr10:19683239-19689633 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm19791
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm19791
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14

• Ensembl
  ENSMUSG00000097214 (Evidence)
• NCBI Gene
  108167767

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097214	Ensembl Gene Model | MGI Sequence Detail	2725	C57BL/6J
transcript	ENSMUST00000180398	Ensembl | MGI Sequence Detail	859	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87