Gm20036 Gene Detail

Summary

• Symbol
  Gm20036
• Name
  predicted gene, 20036

• Feature Type
  lncRNA gene
• IDs
  MGI:5012221
  NCBI Gene: 100504056
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:101879499-101881594 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 51.31 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012221	lncRNA gene	Chr12:101878926-101881912 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015238	unclassified non-coding RNA gene	Chr12:103517024-103519117 (+)
A/J	MGP_AJ_G0015212	unclassified non-coding RNA gene	Chr12:99542818-99544913 (+)
AKR/J	MGP_AKRJ_G0015175	unclassified non-coding RNA gene	Chr12:102377978-102380072 (+)
BALB/cJ	MGP_BALBcJ_G0015174	unclassified non-coding RNA gene	Chr12:99885667-99887760 (+)
C3H/HeJ	MGP_C3HHeJ_G0014998	unclassified non-coding RNA gene	Chr12:102828059-102830154 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015631	unclassified non-coding RNA gene	Chr12:106761681-106763776 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013373	unclassified non-coding RNA gene	Chr12:96571553-96573296 (+)
CAST/EiJ	MGP_CASTEiJ_G0014551	unclassified non-coding RNA gene	Chr12:97647268-97649355 (+)
CBA/J	MGP_CBAJ_G0014977	unclassified non-coding RNA gene	Chr12:110696288-110698381 (+)
DBA/2J	MGP_DBA2J_G0015070	unclassified non-coding RNA gene	Chr12:99068343-99070436 (+)
FVB/NJ	MGP_FVBNJ_G0015081	unclassified non-coding RNA gene	Chr12:97785141-97787232 (+)
LP/J	MGP_LPJ_G0015151	unclassified non-coding RNA gene	Chr12:103372962-103375055 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015108	unclassified non-coding RNA gene	Chr12:114193037-114195128 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015670	unclassified non-coding RNA gene	Chr12:101880272-101882365 (+)
PWK/PhJ	MGP_PWKPhJ_G0014343	unclassified non-coding RNA gene	Chr12:93620667-93622745 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014130	unclassified non-coding RNA gene	Chr12:96060734-96062809 (+)
WSB/EiJ	MGP_WSBEiJ_G0014654	unclassified non-coding RNA gene	Chr12:102762271-102764368 (+)

Homology

• Gene Tree
  Gm20036
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm20036
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  709
• Tissues
  3
• cDNA Data
  1
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000093579 (Evidence)
• NCBI Gene
  100504056

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093579	Ensembl Gene Model | MGI Sequence Detail	2096	C57BL/6J
transcript	ENSMUST00000177547	Ensembl | MGI Sequence Detail	844	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 1

  Primer pair 1

References

• Summaries
  All 7

  Developmental Gene Expression 1

  Phenotypes 2
• Earliest
  J:213692 Zhu JG, et al., Long noncoding RNAs expression profile of the developing mouse heart. J Cell Biochem. 2014 May;115(5):910-8