Gm20144 Pseudogene Detail

Summary

• Symbol
  Gm20144
• Name
  predicted gene, 20144

• Feature Type
  pseudogene
• IDs
  MGI:5012329
  NCBI Gene: 102639204
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:64069123-64069287 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 29.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012329	pseudogene	Chr6:64069068-64069290 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013489	pseudogene	Chr6:63989730-63989894 (+)
A/J	MGP_AJ_G0013474	pseudogene	Chr6:61139047-61139211 (+)
AKR/J	MGP_AKRJ_G0013441	pseudogene	Chr6:63127784-63127948 (+)
BALB/cJ	MGP_BALBcJ_G0013453	pseudogene	Chr6:61598859-61599023 (+)
C3H/HeJ	MGP_C3HHeJ_G0013484	pseudogene	Chr6:121078728-121078892 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013838	pseudogene	Chr6:65434252-65434416 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011912	pseudogene	Chr6:58580310-58580474 (+)
CAST/EiJ	MGP_CASTEiJ_G0013007	pseudogene	Chr6:63390382-63390546 (+)
CBA/J	MGP_CBAJ_G0013270	pseudogene	Chr6:68152566-68152730 (+)
DBA/2J	MGP_DBA2J_G0013354	pseudogene	Chr6:60881918-60882082 (+)
FVB/NJ	MGP_FVBNJ_G0013353	pseudogene	Chr6:60418483-60418647 (+)
LP/J	MGP_LPJ_G0013425	pseudogene	Chr6:63918327-63918491 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013372	pseudogene	Chr6:71855147-71855311 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013837	pseudogene	Chr6:63083719-63083883 (+)
PWK/PhJ	MGP_PWKPhJ_G0012814	pseudogene	Chr6:60053223-60053387 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012598	pseudogene	Chr6:62583446-62583610 (+)
WSB/EiJ	MGP_WSBEiJ_G0013054	pseudogene	Chr6:63394263-63394427 (+)

Homology

• Gene Tree
  Gm20144
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107700 (Evidence)
• NCBI Gene
  102639204

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107700	Ensembl Gene Model | MGI Sequence Detail	165	C57BL/6J
transcript	ENSMUST00000203031	Ensembl | MGI Sequence Detail	165	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;