Gm20257 Pseudogene Detail

Summary

• Symbol
  Gm20257
• Name
  predicted gene, 20257

• Feature Type
  pseudogene
• IDs
  MGI:5012442
  NCBI Gene: 100504501
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:58694104-58694233 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 29.15 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012442	pseudogene	Chr1:58691800-58694990 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039785	pseudogene	Chr1:58543064-58548516 (+)
A/J	MGP_AJ_G0039782	pseudogene	Chr1:56495692-56498593 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0039756	pseudogene	Chr1:56516640-56535416 (+)
C3H/HeJ	MGP_C3HHeJ_G0039413	pseudogene	Chr1:58269534-58302022 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040354	pseudogene	Chr2:121045436-121046322 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036940	pseudogene	Chr1:52588606-52588735 (+)
CAST/EiJ	MGP_CASTEiJ_G0038529	pseudogene	Chr1:57719718-57719847 (+)
CBA/J	MGP_CBAJ_G0039384	pseudogene	Chr1:62717754-62723265 (+)
DBA/2J	MGP_DBA2J_G0039582	pseudogene	Chr1:55910938-55913933 (+)
FVB/NJ	MGP_FVBNJ_G0039540	pseudogene	Chr1:55223852-55227071 (+)
LP/J	MGP_LPJ_G0039619	pseudogene	Chr1:59438161-59441079 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039540	pseudogene	Chr1:65940511-65940640 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040424	pseudogene	Chr1:57978929-58008397 (+)
PWK/PhJ	MGP_PWKPhJ_G0038207	pseudogene	Chr1:55263380-55264245 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037950	pseudogene	Chr1:57565372-57728341 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm20257
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Endonuclease-mediated
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm20257
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000102059 (Evidence)
• NCBI Gene
  100504501

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102059	Ensembl Gene Model | MGI Sequence Detail	130	C57BL/6J
transcript	ENSMUST00000188643	Ensembl | MGI Sequence Detail	130	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;