Gm20387 Gene Detail

Summary

• Symbol
  Gm20387
• Name
  predicted gene 20387

• Feature Type
  lncRNA gene
• IDs
  MGI:5141852
  NCBI Gene: 102639169
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:110616714-110622877 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 51.19 cM

Strain
Comparison

• SNPs within 2kb
  295 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5141852	lncRNA gene	Chr6:110604661-110665539 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004333	antisense lncRNA gene	Chr6:113004113-113010290 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0004293	antisense lncRNA gene	Chr6:111637180-111643354 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0004208	antisense lncRNA gene	Chr6:72671399-72677573 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004446	antisense lncRNA gene	Chr6:115982847-115989010 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003914	antisense lncRNA gene	Chr6:105811201-105817367 (-)
CAST/EiJ	MGP_CASTEiJ_G0004207	antisense lncRNA gene	Chr6:112031069-112037241 (-)
CBA/J	MGP_CBAJ_G0004239	antisense lncRNA gene	Chr6:120470343-120476611 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0004271	antisense lncRNA gene	Chr6:106825783-106831946 (-)
LP/J	MGP_LPJ_G0004334	antisense lncRNA gene	Chr6:113086813-113092990 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004262	antisense lncRNA gene	Chr6:124844926-124851120 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0004160	antisense lncRNA gene	Chr6:106738319-106744595 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004103	antisense lncRNA gene	Chr6:110377594-110383772 (-)
WSB/EiJ	MGP_WSBEiJ_G0004244	antisense lncRNA gene	Chr6:112118864-112125036 (-)

Homology

• Gene Tree
  Gm20387
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm20387
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  3

• Ensembl
  ENSMUSG00000092448 (Evidence)
• NCBI Gene
  102639169

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092448	Ensembl Gene Model | MGI Sequence Detail	6164	C57BL/6J
transcript	ENSMUST00000173609	Ensembl | MGI Sequence Detail	1783	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)