Gm20422 Gene Detail

Summary

• Symbol
  Gm20422
• Name
  predicted gene 20422

• Feature Type
  protein coding gene
• IDs
  MGI:5141887
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:70195512-70227536 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 33.88 cM

Strain
Comparison

• SNPs within 2kb
  873 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5141887	protein coding gene	Chr8:70195512-70227536 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0033674	protein coding gene	Chr8:69957129-69989925 (-)
A/J	MGP_AJ_G0033657	protein coding gene	Chr8:67119493-67151870 (-)
AKR/J	MGP_AKRJ_G0033582	protein coding gene	Chr8:69016400-69058899 (-)
BALB/cJ	MGP_BALBcJ_G0033653	protein coding gene	Chr8:67348165-67379229 (-)
C3H/HeJ	MGP_C3HHeJ_G0033363	protein coding gene	Chr8:69675389-69710490 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0034170	protein coding gene	Chr8:72611949-72648378 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0031114	protein coding gene	Chr8:61946866-61981109 (-)
CAST/EiJ	MGP_CASTEiJ_G0032688	protein coding gene	Chr8:69142847-69179198 (-)
CBA/J	MGP_CBAJ_G0033341	protein coding gene	Chr8:75274451-75305970 (-)
DBA/2J	MGP_DBA2J_G0033495	protein coding gene	Chr8:66849941-66882296 (-)
FVB/NJ	MGP_FVBNJ_G0033436	protein coding gene	Chr8:65943162-65975777 (-)
LP/J	MGP_LPJ_G0033582	protein coding gene	Chr8:70022078-70053296 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0033480	protein coding gene	Chr8:77933792-77967392 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034188	protein coding gene	Chr8:69193040-69232475 (-)
PWK/PhJ	MGP_PWKPhJ_G0032396	protein coding gene	Chr8:66126894-66159349 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0032232	protein coding gene	Chr8:68179884-68216653 (-)
WSB/EiJ	MGP_WSBEiJ_G0032803	protein coding gene	Chr8:69572078-69604277 (-)

Homology

• Gene Tree
  Gm20422
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm20422
• Incidental Mutations
  APF
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• UniProt
  2

• Ensembl
  ENSMUSG00000092544 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092544	Ensembl Gene Model | MGI Sequence Detail	32025	C57BL/6J
transcript	ENSMUST00000149782	Ensembl | MGI Sequence Detail	956	Not Applicable
polypeptide	ENSMUSP00000123252	Ensembl | MGI Sequence Detail	255	Not Applicable

Protein
Information

• UniProt
  2 Sequences
• InterPro Domains
  IPR036051 KRAB domain superfamily
  IPR001909 Krueppel-associated box
  IPR050169 Krueppel C2H2-type zinc-finger
  IPR036236 Zinc finger C2H2 superfamily
  IPR013087 Zinc finger C2H2-type

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;