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Gm20442 Gene Detail
Summary
  • Symbol
    Gm20442
  • Name
    predicted gene 20442
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5141907
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:36054215-36075083 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.70 cM
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5141907
 lncRNA gene Chr17:36054215-36075083 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005729
 lincRNA gene Chr17:35931192-35952138 (-)
A/J MGP_AJ_G0005717
 lincRNA gene Chr17:34818357-34840642 (-)
AKR/J MGP_AKRJ_G0005697
 lincRNA gene Chr17:35244946-35266708 (-)
BALB/cJ MGP_BALBcJ_G0005697
 lincRNA gene Chr17:34957937-34981240 (-)
C3H/HeJ MGP_C3HHeJ_G0005644
 lincRNA gene Chr17:35707251-35728469 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005854
 lincRNA gene Chr17:37403402-37425001 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005209
 lincRNA gene Chr17:32519995-32542024 (-)
CAST/EiJ MGP_CASTEiJ_G0005587
 lincRNA gene Chr17:35815922-35836857 (-)
CBA/J MGP_CBAJ_G0005632
 lincRNA gene Chr17:38978531-39003578 (-)
DBA/2J MGP_DBA2J_G0005650
 lincRNA gene Chr17:34129266-34150250 (-)
FVB/NJ MGP_FVBNJ_G0005676
 lincRNA gene Chr17:33925896-33946496 (-)
LP/J MGP_LPJ_G0005732
 lincRNA gene Chr17:36307546-36329651 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005662
 lincRNA gene Chr17:37747000-37768028 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005855
 lincRNA gene Chr17:35561148-35582269 (-)
PWK/PhJ MGP_PWKPhJ_G0005531
 lincRNA gene Chr17:32988205-33009738 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005451
 lincRNA gene Chr17:33607450-33628234 (-)
WSB/EiJ MGP_WSBEiJ_G0005639
 lincRNA gene Chr17:35708780-35732356 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092600 Ensembl Gene Model | MGI Sequence Detail 20869 C57BL/6J ±  kb
transcript ENSMUST00000174630 Ensembl | MGI Sequence Detail 492 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
    Phenotypes 3
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory