Gm20455 Gene Detail

Summary

• Symbol
  Gm20455
• Name
  predicted gene 20455

• Feature Type
  lncRNA gene
• IDs
  MGI:5141920
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:72140793-72148492 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 37.29 cM

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5141920	lncRNA gene	ChrX:72140793-72148492 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015782	unclassified non-coding RNA gene	ChrX:68802515-68810457 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0015540	unclassified non-coding RNA gene	ChrX:69299541-69308405 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0015095	unclassified non-coding RNA gene	ChrX:54822628-54833387 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0015618	unclassified non-coding RNA gene	ChrX:68483999-68492476 (+)
FVB/NJ	MGP_FVBNJ_G0015623	unclassified non-coding RNA gene	ChrX:68010646-69614489 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0016218	unclassified non-coding RNA gene	ChrX:68646154-68654715 (+)
PWK/PhJ	MGP_PWKPhJ_G0014877	unclassified non-coding RNA gene	ChrX:52843756-52851012 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0015199	unclassified non-coding RNA gene	ChrX:67940409-67948228 (+)

Homology

• Gene Tree
  Gm20455
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  11

• Ensembl
  ENSMUSG00000092255 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092255	Ensembl Gene Model | MGI Sequence Detail	7700	C57BL/6J
transcript	ENSMUST00000174100	Ensembl | MGI Sequence Detail	1138	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;