Gm20457 Gene Detail

Summary

• Symbol
  Gm20457
• Name
  predicted gene 20457

• Feature Type
  lncRNA gene
• IDs
  MGI:5141922
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:63987298-63995712 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 34.64 cM

Strain
Comparison

• SNPs within 2kb
  334 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5141922	lncRNA gene	Chr7:63987298-63995712 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004459	antisense lncRNA gene	Chr7:65475549-65483906 (-)
A/J	MGP_AJ_G0004438	antisense lncRNA gene	Chr7:64208094-64216340 (-)
AKR/J	MGP_AKRJ_G0004421	antisense lncRNA gene	Chr7:65564015-65572380 (-)
BALB/cJ	MGP_BALBcJ_G0004423	antisense lncRNA gene	Chr7:63947648-63956010 (-)
C3H/HeJ	MGP_C3HHeJ_G0004373	antisense lncRNA gene	Chr7:66214165-66222502 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004574	antisense lncRNA gene	Chr7:68298599-68307517 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004029	antisense lncRNA gene	Chr7:67153641-67162143 (-)
CAST/EiJ	MGP_CASTEiJ_G0004333	antisense lncRNA gene	Chr7:56908106-56917783 (-)
CBA/J	MGP_CBAJ_G0004367	antisense lncRNA gene	Chr7:70502499-70510854 (-)
DBA/2J	MGP_DBA2J_G0004381	antisense lncRNA gene	Chr7:62959669-62967875 (-)
FVB/NJ	MGP_FVBNJ_G0004399	antisense lncRNA gene	Chr7:63058698-63067099 (-)
LP/J	MGP_LPJ_G0004462	antisense lncRNA gene	Chr7:66713016-66728742 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004390	antisense lncRNA gene	Chr7:70777551-70785894 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004572	antisense lncRNA gene	Chr7:64847029-64855377 (-)
PWK/PhJ	MGP_PWKPhJ_G0004286	antisense lncRNA gene	Chr7:55968925-55977298 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004227	antisense lncRNA gene	Chr7:51983629-51992897 (-)
WSB/EiJ	MGP_WSBEiJ_G0004372	antisense lncRNA gene	Chr7:65230677-65238965 (-)

Homology

• Gene Tree
  Gm20457
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Targeted
  3
• Genomic Mutations
  4 involving Gm20457
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000092187 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092187	Ensembl Gene Model | MGI Sequence Detail	8415	C57BL/6J
transcript	ENSMUST00000173374	Ensembl | MGI Sequence Detail	682	Not Applicable

References

• Summaries
  All 11

  Diseases 1

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:348102 Unda BK, et al., Impaired OTUD7A-dependent Ankyrin regulation mediates neuronal dysfunction in mouse and human models of the 15q13.3 microdeletion syndrome. Mol Psychiatry. 2023 Apr;28(4):1747-1769

TSS for Gm20457:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr72786	Chr7:63995142-63995176 (-)	553 bp