Gm20493 Pseudogene Detail

Summary

• Symbol
  Gm20493
• Name
  predicted gene 20493

• Feature Type
  pseudogene
• IDs
  MGI:5141958
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:34351952-34352588 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 17.98 cM

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5141958	pseudogene	Chr17:34351952-34352588 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011341	pseudogene	Chr17:34112787-34112999 (-)
A/J	MGP_AJ_G0011328	pseudogene	Chr17:32925720-32925932 (-)
AKR/J	MGP_AKRJ_G0011292	pseudogene	Chr17:33354821-33355033 (-)
BALB/cJ	MGP_BALBcJ_G0011304	pseudogene	Chr17:33100478-33100690 (-)
C3H/HeJ	MGP_C3HHeJ_G0011193	pseudogene	Chr17:33701207-33701419 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011594	pseudogene	Chr17:35414187-35414399 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010165	pseudogene	Chr17:30464660-30464871 (-)
CAST/EiJ	MGP_CASTEiJ_G0011012	pseudogene	Chr17:33797936-33798148 (-)
CBA/J	MGP_CBAJ_G0011173	pseudogene	Chr17:36816021-36816233 (-)
DBA/2J	MGP_DBA2J_G0011226	pseudogene	Chr17:32310349-32310561 (-)
FVB/NJ	MGP_FVBNJ_G0011226	pseudogene	Chr17:32179930-32180142 (-)
LP/J	MGP_LPJ_G0011308	pseudogene	Chr17:34388269-34388481 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011222	pseudogene	Chr17:35851082-35851294 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011573	pseudogene	Chr17:33692967-33693179 (-)
PWK/PhJ	MGP_PWKPhJ_G0010884	pseudogene	Chr17:31238265-31238477 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010709	pseudogene	Chr17:31642180-31642392 (-)
WSB/EiJ	MGP_WSBEiJ_G0011054	pseudogene	Chr17:33706225-33706437 (-)

Homology

• Gene Tree
  Gm20493
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000092246 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092246	Ensembl Gene Model | MGI Sequence Detail	637	C57BL/6J
transcript	ENSMUST00000173706	Ensembl | MGI Sequence Detail	392	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;