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Gm20509 Gene Detail
Summary
  • Symbol
    Gm20509
  • Name
    predicted gene 20509
  • Feature Type
    protein coding gene
  • IDs
    MGI:5141974
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:73009752-73029619 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 40.08 cM
Strain
Comparison
more
  • SNPs within 2kb
    669 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5141974
 protein coding gene Chr9:73009752-73029619 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035027
 protein coding gene Chr9:73320589-73335750 (+)
A/J MGP_AJ_G0035008
 protein coding gene Chr9:70748317-70764005 (+)
AKR/J MGP_AKRJ_G0034937
 protein coding gene Chr9:72446898-72462407 (+)
BALB/cJ MGP_BALBcJ_G0035000
 protein coding gene Chr9:70455046-70470504 (+)
C3H/HeJ MGP_C3HHeJ_G0034709
 protein coding gene Chr9:72942602-72960987 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035519
 protein coding gene Chr9:75236835-75253626 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032430
 protein coding gene Chr9:70216045-70238819 (+)
CAST/EiJ MGP_CASTEiJ_G0034031
 protein coding gene Chr9:73281002-73298857 (+)
CBA/J MGP_CBAJ_G0034682
 protein coding gene Chr9:77845244-77860446 (+)
DBA/2J MGP_DBA2J_G0034841
 protein coding gene Chr9:70467075-70482676 (+)
FVB/NJ MGP_FVBNJ_G0034783
 protein coding gene Chr9:69777349-69792714 (+)
LP/J MGP_LPJ_G0034922
 protein coding gene Chr9:73536278-73551503 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034824
 protein coding gene Chr9:78941671-78958546 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035541
 protein coding gene Chr9:72607211-72622441 (+)
PWK/PhJ MGP_PWKPhJ_G0033735
 protein coding gene Chr9:70745089-70760526 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033568
 protein coding gene Chr9:72882550-72899959 (+)
WSB/EiJ MGP_WSBEiJ_G0034143
 protein coding gene Chr9:72535591-72553211 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092310 Ensembl Gene Model | MGI Sequence Detail 19868 C57BL/6J ±  kb
transcript ENSMUST00000174203 Ensembl | MGI Sequence Detail 1201 Not Applicable  
polypeptide ENSMUSP00000134473 Ensembl | MGI Sequence Detail 386 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR051778 KH Domain-Containing Protein 1
    IPR031952 KH-like RNA-binding domain
    IPR036612 K Homology domain, type 1 superfamily
    IPR000988 Large ribosomal subunit protein eL24-related
    IPR038630 Ribosomal protein L24e/L24 superfamily
References
more
  • Summaries
    All 7
    Phenotypes 4
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory