Gm20574 Pseudogene Detail

Summary

• Symbol
  Gm20574
• Name
  predicted gene, 20574

• Feature Type
  pseudogene
• IDs
  MGI:5295681
  NCBI Gene: 100125870
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:41164927-41179032 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 19.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  543 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5295681	pseudogene	Chr17:41160208-41179117 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039867	pseudogene	Chr17:41660229-41675025 (+)
A/J	MGP_AJ_G0039873	pseudogene	Chr17:40704543-40718648 (+)
AKR/J	MGP_AKRJ_G0039797	pseudogene	Chr17:40879808-40893910 (+)
BALB/cJ	MGP_BALBcJ_G0039850	pseudogene	Chr17:40641386-40655502 (+)
C3H/HeJ	MGP_C3HHeJ_G0039496	pseudogene	Chr17:41568913-41583024 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040416	pseudogene	Chr17:43519621-43534871 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037011	pseudogene	Chr17:37797045-37809615 (+)
CAST/EiJ	MGP_CASTEiJ_G0038602	pseudogene	Chr17:41579303-41593428 (+)
CBA/J	MGP_CBAJ_G0039464	pseudogene	Chr17:45057791-45073839 (+)
DBA/2J	MGP_DBA2J_G0039668	pseudogene	Chr17:39516514-39531141 (+)
FVB/NJ	MGP_FVBNJ_G0039626	pseudogene	Chr17:39163436-39177579 (+)
LP/J	MGP_LPJ_G0039706	pseudogene	Chr17:42297609-42313850 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039623	pseudogene	Chr17:44499349-44514537 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040516	pseudogene	Chr17:41210619-41225818 (+)
PWK/PhJ	MGP_PWKPhJ_G0038275	pseudogene	Chr17:38878312-38892760 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038019	pseudogene	Chr17:38182654-38196854 (+)
WSB/EiJ	MGP_WSBEiJ_G0038833	pseudogene	Chr17:41765881-41780539 (+)

Homology

• Gene Tree
  Gm20574
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098082 (Evidence)
• NCBI Gene
  100125870

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098082	Ensembl Gene Model | MGI Sequence Detail	14106	C57BL/6J
transcript	ENSMUST00000182867	Ensembl | MGI Sequence Detail	917	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;