Gm20614 Pseudogene Detail

Summary

• Symbol
  Gm20614
• Name
  predicted gene 20614

• Feature Type
  pseudogene
• IDs
  MGI:5313061
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:20254788-20262132 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 12.44 cM

Strain
Comparison

• SNPs within 2kb
  307 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313061	pseudogene	Chr16:20254788-20262132 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039865	pseudogene	Chr16:17758339-17769933 (+)
A/J	MGP_AJ_G0039871	pseudogene	Chr16:16909367-16916737 (+)
AKR/J	MGP_AKRJ_G0039795	pseudogene	Chr16:17556697-17565453 (+)
BALB/cJ	MGP_BALBcJ_G0039848	pseudogene	Chr16:17065993-17073281 (+)
C3H/HeJ	MGP_C3HHeJ_G0039494	pseudogene	Chr16:17710877-17718960 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040414	pseudogene	Chr16:18104708-18113838 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038600	pseudogene	Chr16:17689330-17695503 (+)
CBA/J	MGP_CBAJ_G0039462	pseudogene	Chr16:18840378-18851832 (+)
DBA/2J	MGP_DBA2J_G0039666	pseudogene	Chr16:16838513-16846516 (+)
FVB/NJ	MGP_FVBNJ_G0039624	pseudogene	Chr16:16871863-16879215 (+)
LP/J	MGP_LPJ_G0039704	pseudogene	Chr16:17494588-17502073 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039621	pseudogene	Chr16:18540061-18547468 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040514	pseudogene	Chr16:17509494-17517967 (+)
PWK/PhJ	MGP_PWKPhJ_G0038273	pseudogene	Chr16:17089718-17097292 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038017	pseudogene	Chr16:17307026-17315785 (+)
WSB/EiJ	MGP_WSBEiJ_G0038831	pseudogene	Chr16:17502465-17511726 (+)

Homology

• Gene Tree
  Gm20614
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000093649 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093649	Ensembl Gene Model | MGI Sequence Detail	7345	C57BL/6J
transcript	ENSMUST00000177106	Ensembl | MGI Sequence Detail	632	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;