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Gm20628 Gene Detail
Summary
  • Symbol
    Gm20628
  • Name
    predicted gene 20628
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5313075
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:96174391-96177605 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 41.71 cM
Strain
Comparison
more
  • SNPs within 2kb
    122 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5313075
 lncRNA gene Chr3:96174391-96177605 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003794
 antisense lncRNA gene Chr3:97079851-97083065 (-)
A/J MGP_AJ_G0003775
 antisense lncRNA gene Chr3:94032611-94035825 (-)
AKR/J MGP_AKRJ_G0003751
 antisense lncRNA gene Chr3:96239639-96242853 (-)
BALB/cJ MGP_BALBcJ_G0003762
 antisense lncRNA gene Chr3:93809616-93824487 (-)
C3H/HeJ MGP_C3HHeJ_G0003709
 antisense lncRNA gene Chr3:96521047-96524276 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003903
 antisense lncRNA gene Chr3:100638549-100643969 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003407
 antisense lncRNA gene Chr3:90352589-90355849 (-)
CAST/EiJ MGP_CASTEiJ_G0003673
 antisense lncRNA gene Chr3:95834515-95838630 (-)
CBA/J MGP_CBAJ_G0003704
 antisense lncRNA gene Chr3:104325786-104328825 (-)
DBA/2J MGP_DBA2J_G0003715
 antisense lncRNA gene Chr3:93333436-93337151 (-)
FVB/NJ MGP_FVBNJ_G0003736
 antisense lncRNA gene Chr3:91393922-91397231 (-)
LP/J MGP_LPJ_G0003796
 antisense lncRNA gene Chr3:98387306-98407836 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003723
 antisense lncRNA gene Chr3:110415625-110419572 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003904
 antisense lncRNA gene Chr3:95870280-95873461 (-)
PWK/PhJ MGP_PWKPhJ_G0003629
 antisense lncRNA gene Chr3:93232814-93235941 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003573
 antisense lncRNA gene Chr3:94170150-94174505 (-)
WSB/EiJ MGP_WSBEiJ_G0003709
 antisense lncRNA gene Chr3:96265801-96268834 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093656 Ensembl Gene Model | MGI Sequence Detail 3215 C57BL/6J ±  kb
transcript ENSMUST00000177363 Ensembl | MGI Sequence Detail 3215 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 4
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory