About   Help   FAQ
Gm20648 Pseudogene Detail
Summary
  • Symbol
    Gm20648
  • Name
    predicted gene 20648
  • Feature Type
    pseudogene
  • IDs
    MGI:5313095
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:79980711-79981038 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 43.89 cM
Strain
Comparison
more
  • SNPs within 2kb
    86 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5313095
 pseudogene Chr9:79980711-79981038 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014184
 pseudogene Chr9:80638083-80638410 (-)
A/J MGP_AJ_G0014202
 pseudogene Chr9:77862918-77863245 (-)
AKR/J MGP_AKRJ_G0014127
 pseudogene Chr9:79686059-79686386 (-)
BALB/cJ MGP_BALBcJ_G0014152
 pseudogene Chr9:77494482-77494809 (-)
C3H/HeJ MGP_C3HHeJ_G0013983
 pseudogene Chr9:80207482-80207809 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014596
 pseudogene Chr9:82817564-82817891 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012427
 pseudogene Chr9:77006925-77007252 (-)
CAST/EiJ MGP_CASTEiJ_G0013640
 pseudogene Chr9:80554381-80554708 (-)
CBA/J MGP_CBAJ_G0013965
 pseudogene Chr9:85775412-85775739 (-)
DBA/2J MGP_DBA2J_G0014049
 pseudogene Chr9:77474759-77475086 (-)
FVB/NJ MGP_FVBNJ_G0014048
 pseudogene Chr9:76690616-76690943 (-)
LP/J MGP_LPJ_G0014132
 pseudogene Chr9:80875811-80876138 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0014079
 pseudogene Chr9:86995595-86995922 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014569
 pseudogene Chr9:79914180-79914507 (-)
PWK/PhJ MGP_PWKPhJ_G0013455
 pseudogene Chr9:77681188-77681515 (-)
SPRET/EiJ MGP_SPRETEiJ_G0013240
 pseudogene Chr9:80052826-80053154 (-)
WSB/EiJ MGP_WSBEiJ_G0013698
 pseudogene Chr9:79843940-79844267 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm20648
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093779 Ensembl Gene Model | MGI Sequence Detail 328 C57BL/6J ±  kb
transcript ENSMUST00000175815 Ensembl | MGI Sequence Detail 328 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 7
  • Earliest
    J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
  • Latest
    J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory