Gm20657 Pseudogene Detail

Summary

• Symbol
  Gm20657
• Name
  predicted gene 20657

• Feature Type
  pseudogene
• IDs
  MGI:5313104
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:64504334-64513194 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 30.15 cM

Strain
Comparison

• SNPs within 2kb
  259 from dbSNP Build 142
• Strain Annotations
  6

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313104	pseudogene	Chr3:64504334-64513194 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0040217	pseudogene	Chr3:63100673-63130572 (+)
BALB/cJ	MGP_BALBcJ_G0040281	pseudogene	Chr3:61646026-61661947 (+)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0037295	pseudogene	Chr3:57668451-57679131 (+)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0040973	pseudogene	Chr3:63013748-63052256 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0038384	pseudogene	Chr3:61847329-62184099 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm20657
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm20657
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8

• Ensembl
  ENSMUSG00000093484 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093484	Ensembl Gene Model | MGI Sequence Detail	8861	C57BL/6J
transcript	ENSMUST00000177079	Ensembl | MGI Sequence Detail	515	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426