Gm20661 Gene Detail

Summary

• Symbol
  Gm20661
• Name
  predicted gene 20661

• Feature Type
  protein coding gene
• IDs
  MGI:5313108
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr9:107860257-107872206 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 59.07 cM

Strain
Comparison

• SNPs within 2kb
  317 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313108	protein coding gene	Chr9:107860257-107872206 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0035277	protein coding gene	Chr9:109897994-109911295 (+)
A/J	MGP_AJ_G0035256	protein coding gene	Chr9:105887125-105899069 (+)
AKR/J	MGP_AKRJ_G0035188	protein coding gene	Chr9:108528036-108539988 (+)
BALB/cJ	MGP_BALBcJ_G0035250	protein coding gene	Chr9:105557506-105570988 (+)
C3H/HeJ	MGP_C3HHeJ_G0034960	protein coding gene	Chr9:108925580-108937200 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0035770	protein coding gene	Chr9:112870886-112885156 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032668	protein coding gene	Chr9:103320499-103331940 (+)
CAST/EiJ	MGP_CASTEiJ_G0034271	protein coding gene	Chr9:108882991-108894829 (+)
CBA/J	MGP_CBAJ_G0034928	protein coding gene	Chr9:116869629-116881641 (+)
DBA/2J	MGP_DBA2J_G0035089	protein coding gene	Chr9:105343121-105355668 (+)
FVB/NJ	MGP_FVBNJ_G0035037	protein coding gene	Chr9:104107939-104119401 (+)
LP/J	MGP_LPJ_G0035165	protein coding gene	Chr9:110093504-110105753 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0035076	protein coding gene	Chr9:118462291-118475226 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0035791	protein coding gene	Chr9:108805450-108818382 (+)
PWK/PhJ	MGP_PWKPhJ_G0033978	protein coding gene	Chr9:105663856-105676002 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0033813	protein coding gene	Chr9:108869675-108882918 (+)
WSB/EiJ	MGP_WSBEiJ_G0034392	protein coding gene	Chr9:108685790-108697663 (+)

Homology

• Gene Tree
  Gm20661
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• UniProt
  1

• Ensembl
  ENSMUSG00000079323 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000079323	Ensembl Gene Model | MGI Sequence Detail	11950	C57BL/6J
transcript	ENSMUST00000177368	Ensembl | MGI Sequence Detail	900	Not Applicable
polypeptide	ENSMUSP00000135553	Ensembl | MGI Sequence Detail	53	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm20661:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr87046	Chr9:107860168-107860188 (+)	-79 bp
Tssr87047	Chr9:107860190-107860236 (+)	-44 bp
Tssr87048	Chr9:107860238-107860265 (+)	-5 bp