Gm20681 Gene Detail

Summary

• Symbol
  Gm20681
• Name
  predicted gene 20681

• Feature Type
  lncRNA gene
• IDs
  MGI:5313128
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:123100776-123103183 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 70.97 cM

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313128	lncRNA gene	Chr8:123100776-123103183 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015727	unclassified non-coding RNA gene	Chr8:125905788-125908193 (+)
A/J	MGP_AJ_G0015705	unclassified non-coding RNA gene	Chr8:120696151-120698550 (+)
AKR/J	MGP_AKRJ_G0015668	unclassified non-coding RNA gene	Chr8:124215666-124218065 (+)
BALB/cJ	MGP_BALBcJ_G0015666	unclassified non-coding RNA gene	Chr8:120899203-120901602 (+)
C3H/HeJ	MGP_C3HHeJ_G0015488	unclassified non-coding RNA gene	Chr8:124915396-124917792 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016121	unclassified non-coding RNA gene	Chr8:130095864-130098272 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0015042	unclassified non-coding RNA gene	Chr8:124989828-124992221 (+)
CBA/J	MGP_CBAJ_G0015468	unclassified non-coding RNA gene	Chr8:134900433-134902838 (+)
DBA/2J	MGP_DBA2J_G0015565	unclassified non-coding RNA gene	Chr8:119890199-119892612 (+)
FVB/NJ	MGP_FVBNJ_G0015571	unclassified non-coding RNA gene	Chr8:119017293-119019700 (+)
LP/J	MGP_LPJ_G0015645	unclassified non-coding RNA gene	Chr8:126038329-126040742 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015593	unclassified non-coding RNA gene	Chr8:137078199-137080616 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016163	unclassified non-coding RNA gene	Chr8:124399584-124401991 (+)
PWK/PhJ	MGP_PWKPhJ_G0014823	unclassified non-coding RNA gene	Chr8:119707847-119710339 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014612	unclassified non-coding RNA gene	Chr8:123123222-123125641 (+)
WSB/EiJ	MGP_WSBEiJ_G0015146	unclassified non-coding RNA gene	Chr8:125151109-125153521 (+)

Homology

• Gene Tree
  Gm20681
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000093682 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093682	Ensembl Gene Model | MGI Sequence Detail	2408	C57BL/6J
transcript	ENSMUST00000176061	Ensembl | MGI Sequence Detail	503	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;