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Gm20688 Gene Detail
Summary
  • Symbol
    Gm20688
  • Name
    predicted gene 20688
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5313135
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr15:77275902-77276581 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 36.40 cM
Strain
Comparison
more
  • SNPs within 2kb
    170 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5313135
 lncRNA gene Chr15:77275902-77276581 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015301
 unclassified non-coding RNA gene Chr15:77558189-77560088 (-)
A/J MGP_AJ_G0015276
 unclassified non-coding RNA gene Chr15:74682676-74683353 (-)
AKR/J MGP_AKRJ_G0015239
 unclassified non-coding RNA gene Chr15:76727622-76728301 (-)
BALB/cJ MGP_BALBcJ_G0015240
 unclassified non-coding RNA gene Chr15:74724428-74726328 (-)
C3H/HeJ MGP_C3HHeJ_G0015063
 unclassified non-coding RNA gene Chr15:76765131-76765808 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0013435
 unclassified non-coding RNA gene Chr15:71353181-71353693 (-)
CAST/EiJ MGP_CASTEiJ_G0014614
 unclassified non-coding RNA gene Chr15:77576536-77577160 (-)
CBA/J MGP_CBAJ_G0015043
 unclassified non-coding RNA gene Chr15:82978707-82979382 (-)
DBA/2J MGP_DBA2J_G0015137
 unclassified non-coding RNA gene Chr15:74222006-74222683 (-)
FVB/NJ MGP_FVBNJ_G0015145
 unclassified non-coding RNA gene Chr15:73284928-73285542 (-)
LP/J MGP_LPJ_G0015217
 unclassified non-coding RNA gene Chr15:78036920-78037858 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015170
 unclassified non-coding RNA gene Chr15:88280968-88281647 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015733
 unclassified non-coding RNA gene Chr15:76975727-76976403 (-)
PWK/PhJ MGP_PWKPhJ_G0014405
 unclassified non-coding RNA gene Chr15:74394671-74395415 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014193
 unclassified non-coding RNA gene Chr15:76928312-76928824 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    3
  • Radiation induced
    1
  • Genomic Mutations
    4 involving Gm20688
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093458 Ensembl Gene Model | MGI Sequence Detail 680 C57BL/6J ±  kb
transcript ENSMUST00000176779 Ensembl | MGI Sequence Detail 512 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 22
    Phenotypes 20
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory