Gm20690 Pseudogene Detail

Summary

• Symbol
  Gm20690
• Name
  predicted gene 20690

• Feature Type
  pseudogene
• IDs
  MGI:5313137
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:68809163-68809477 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 32.08 cM

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  35

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313137	pseudogene	Chr3:68809140-68809494 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012842	pseudogene	Chr4:118752638-118752960 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012843	pseudogene	Chr4:118752646-118752960 (-)
A/J	MGP_AJ_G0012826	pseudogene	Chr4:114175081-114175403 (-)
A/J	MGP_AJ_G0012827	pseudogene	Chr4:114175089-114175403 (-)
AKR/J	MGP_AKRJ_G0012796	pseudogene	Chr4:116671705-116672027 (-)
AKR/J	MGP_AKRJ_G0012797	pseudogene	Chr4:116671713-116672027 (-)
BALB/cJ	MGP_BALBcJ_G0013553	pseudogene	Chr6:85281955-85282277 (+)
BALB/cJ	MGP_BALBcJ_G0013552	pseudogene	Chr6:85281955-85282269 (+)
C3H/HeJ	MGP_C3HHeJ_G0012664	pseudogene	Chr4:118254217-118254539 (-)
C3H/HeJ	MGP_C3HHeJ_G0012665	pseudogene	Chr4:118254225-118254539 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012491	pseudogene	Chr3:70664295-70664633 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012492	pseudogene	Chr3:70664318-70664624 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011403	pseudogene	Chr4:108201752-108202066 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011402	pseudogene	Chr4:108201744-108202066 (-)
CAST/EiJ	MGP_CASTEiJ_G0012415	pseudogene	Chr4:115477989-115478303 (-)
CAST/EiJ	MGP_CASTEiJ_G0012414	pseudogene	Chr4:115477981-115478303 (-)
CBA/J	MGP_CBAJ_G0012640	pseudogene	Chr4:126699827-126700149 (-)
CBA/J	MGP_CBAJ_G0012641	pseudogene	Chr4:126699835-126700149 (-)
DBA/2J	MGP_DBA2J_G0012702	pseudogene	Chr4:114791316-114791630 (-)
DBA/2J	MGP_DBA2J_G0012701	pseudogene	Chr4:114791308-114791630 (-)
FVB/NJ	MGP_FVBNJ_G0012705	pseudogene	Chr4:113308667-113308981 (-)
FVB/NJ	MGP_FVBNJ_G0012704	pseudogene	Chr4:113308659-113308981 (-)
LP/J	MGP_LPJ_G0012778	pseudogene	Chr4:118941315-118941637 (-)
LP/J	MGP_LPJ_G0012779	pseudogene	Chr4:118941323-118941637 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012717	pseudogene	Chr4:131622848-131623162 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012716	pseudogene	Chr4:131622840-131623162 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013158	pseudogene	Chr4:117819943-117820257 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013157	pseudogene	Chr4:117819935-117820257 (-)
PWK/PhJ	MGP_PWKPhJ_G0012235	pseudogene	Chr4:111612426-111612740 (-)
PWK/PhJ	MGP_PWKPhJ_G0012234	pseudogene	Chr4:111612418-111612740 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012045	pseudogene	Chr4:114138780-114139094 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012044	pseudogene	Chr4:114138772-114139094 (-)
WSB/EiJ	MGP_WSBEiJ_G0012442	pseudogene	Chr4:117707717-117708039 (-)
WSB/EiJ	MGP_WSBEiJ_G0012443	pseudogene	Chr4:117707725-117708039 (-)

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm20690
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39

• Ensembl
  ENSMUSG00000093730 (Evidence), ENSMUSG00000103007 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093730	Ensembl Gene Model | MGI Sequence Detail	315	C57BL/6J
transcript	ENSMUST00000177341	Ensembl | MGI Sequence Detail	315	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426