Gm20692 Gene Detail

Summary

• Symbol
  Gm20692
• Name
  predicted gene 20692

• Feature Type
  lncRNA gene
• IDs
  MGI:5313139
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:120489410-120490193 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 56.95 cM

Strain
Comparison

• SNPs within 2kb
  26 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313139	lncRNA gene	Chr6:120489410-120490193 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004347	antisense lncRNA gene	Chr6:123410036-123410819 (+)
A/J	MGP_AJ_G0004324	antisense lncRNA gene	Chr6:118663418-118664201 (+)
AKR/J	MGP_AKRJ_G0004307	antisense lncRNA gene	Chr6:121870440-121871253 (+)
BALB/cJ	MGP_BALBcJ_G0004310	antisense lncRNA gene	Chr6:118427694-118428477 (+)
C3H/HeJ	MGP_C3HHeJ_G0004194	antisense lncRNA gene	Chr6:62444890-62445593 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004460	antisense lncRNA gene	Chr6:126557360-126559547 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003927	antisense lncRNA gene	Chr6:115565948-115566743 (+)
CAST/EiJ	MGP_CASTEiJ_G0004221	antisense lncRNA gene	Chr6:122308428-122309207 (+)
CBA/J	MGP_CBAJ_G0004253	antisense lncRNA gene	Chr6:131595415-131599886 (+)
DBA/2J	MGP_DBA2J_G0004268	antisense lncRNA gene	Chr6:117548970-117549949 (+)
FVB/NJ	MGP_FVBNJ_G0004285	antisense lncRNA gene	Chr6:116680176-116681210 (+)
LP/J	MGP_LPJ_G0004348	antisense lncRNA gene	Chr6:123396464-123399119 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004276	antisense lncRNA gene	Chr6:135582025-135582796 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004457	antisense lncRNA gene	Chr6:121887555-121889827 (+)
PWK/PhJ	MGP_PWKPhJ_G0004174	antisense lncRNA gene	Chr6:116589664-116590448 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004117	antisense lncRNA gene	Chr6:120620872-120621647 (+)
WSB/EiJ	MGP_WSBEiJ_G0004258	antisense lncRNA gene	Chr6:122181057-122181819 (+)

Homology

• Gene Tree
  Gm20692
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000093739 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093739	Ensembl Gene Model | MGI Sequence Detail	784	C57BL/6J
transcript	ENSMUST00000177251	Ensembl | MGI Sequence Detail	681	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;