Mipep-ps Pseudogene Detail

Summary

• Symbol
  Mipep-ps
• Name
  mitochondrial intermediate peptidase, pseudogene
• Synonyms
  Gm20704

• Feature Type
  pseudogene
• IDs
  MGI:5313151
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:155384567-155384857 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 77.26 cM

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313151	pseudogene	Chr2:155384567-155384857 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011936	pseudogene	Chr2:160374975-160375265 (+)
A/J	MGP_AJ_G0011930	pseudogene	Chr2:153998003-153998293 (+)
AKR/J	MGP_AKRJ_G0011896	pseudogene	Chr2:158467465-158467755 (+)
BALB/cJ	MGP_BALBcJ_G0011907	pseudogene	Chr2:154296719-154297009 (+)
C3H/HeJ	MGP_C3HHeJ_G0011787	pseudogene	Chr2:158826124-158826414 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012208	pseudogene	Chr2:165073265-165073555 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010677	pseudogene	Chr2:147496269-147496559 (+)
CAST/EiJ	MGP_CASTEiJ_G0011574	pseudogene	Chr2:159140222-159140512 (+)
CBA/J	MGP_CBAJ_G0011763	pseudogene	Chr2:171070265-171070555 (+)
DBA/2J	MGP_DBA2J_G0011815	pseudogene	Chr2:153179690-153179980 (+)
FVB/NJ	MGP_FVBNJ_G0011822	pseudogene	Chr2:151555010-151555300 (+)
LP/J	MGP_LPJ_G0011882	pseudogene	Chr2:160515923-160516213 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011821	pseudogene	Chr2:175069882-175070172 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012207	pseudogene	Chr2:158351332-158351622 (+)
PWK/PhJ	MGP_PWKPhJ_G0011423	pseudogene	Chr2:152675488-152675778 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011238	pseudogene	Chr2:157279871-157280161 (+)
WSB/EiJ	MGP_WSBEiJ_G0011593	pseudogene	Chr2:159239901-159240191 (+)

Homology

• Gene Tree
  Mipep-ps
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000093624 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093624	Ensembl Gene Model | MGI Sequence Detail	291	C57BL/6J
transcript	ENSMUST00000177439	Ensembl | MGI Sequence Detail	291	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;