Gm21893 Pseudogene Detail

Summary

• Symbol
  Gm21893
• Name
  predicted gene, 21893

• Feature Type
  pseudogene
• IDs
  MGI:5434057
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:128271065-128271461 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434057	pseudogene	Chr6:128271065-128271461 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013713	pseudogene	Chr6:131893286-131893682 (+)
A/J	MGP_AJ_G0013700	pseudogene	Chr6:126838188-126838584 (+)
AKR/J	MGP_AKRJ_G0013662	pseudogene	Chr6:130251871-130252267 (+)
BALB/cJ	MGP_BALBcJ_G0013678	pseudogene	Chr6:126405690-126406086 (+)
C3H/HeJ	MGP_C3HHeJ_G0013522	pseudogene	Chr6:130390795-130391191 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014067	pseudogene	Chr6:135325249-135325645 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012050	pseudogene	Chr6:124038365-124038741 (+)
CAST/EiJ	MGP_CASTEiJ_G0013210	pseudogene	Chr6:130674451-130674847 (+)
CBA/J	MGP_CBAJ_G0013493	pseudogene	Chr6:140536037-140536433 (+)
DBA/2J	MGP_DBA2J_G0013574	pseudogene	Chr6:125729520-125729916 (+)
FVB/NJ	MGP_FVBNJ_G0013574	pseudogene	Chr6:124653048-124653444 (+)
LP/J	MGP_LPJ_G0013652	pseudogene	Chr6:132012416-132012812 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013586	pseudogene	Chr6:144386844-144387240 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014059	pseudogene	Chr6:130261240-130261636 (+)
PWK/PhJ	MGP_PWKPhJ_G0013015	pseudogene	Chr6:124031626-124032022 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012796	pseudogene	Chr6:128371757-128372153 (+)
WSB/EiJ	MGP_WSBEiJ_G0013263	pseudogene	Chr6:130652222-130652618 (+)

Homology

• Gene Tree
  Gm21893
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  3
• Gene trapped
  3
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000095262 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095262	Ensembl Gene Model | MGI Sequence Detail	397	C57BL/6J
transcript	ENSMUST00000179119	Ensembl | MGI Sequence Detail	397	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14