Gm20756 Gene Detail

Summary

• Symbol
  Gm20756
• Name
  predicted gene, 20756

• Feature Type
  lncRNA gene
• IDs
  MGI:5434112
  NCBI Gene: 626904
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:25931425-25977226 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1648 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434112	lncRNA gene	Chr6:25931425-25977226 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006913	lincRNA gene	Chr6:23546543-23596275 (+)
A/J	MGP_AJ_G0006907	lincRNA gene	Chr6:22546428-22593913 (+)
AKR/J	MGP_AKRJ_G0006877	lincRNA gene	Chr6:23317567-23369148 (+)
BALB/cJ	MGP_BALBcJ_G0006883	lincRNA gene	Chr6:22693435-22744769 (+)
C3H/HeJ	MGP_C3HHeJ_G0006828	lincRNA gene	Chr6:23302606-23349819 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007048	lincRNA gene	Chr6:24242784-24296577 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006295	lincRNA gene	Chr6:20920182-20969550 (+)
CAST/EiJ	MGP_CASTEiJ_G0006745	lincRNA gene	Chr6:23083998-23131338 (+)
CBA/J	MGP_CBAJ_G0006810	lincRNA gene	Chr6:25112201-25165966 (+)
DBA/2J	MGP_DBA2J_G0006830	lincRNA gene	Chr6:22523491-22569109 (+)
FVB/NJ	MGP_FVBNJ_G0006853	lincRNA gene	Chr6:22265097-22314552 (+)
LP/J	MGP_LPJ_G0006913	lincRNA gene	Chr6:23672836-23723551 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006834	lincRNA gene	Chr6:27190165-27252497 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007050	lincRNA gene	Chr6:23210804-23258104 (+)
PWK/PhJ	MGP_PWKPhJ_G0006687	lincRNA gene	Chr6:22036243-22081952 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006596	lincRNA gene	Chr6:22907339-22963364 (+)
WSB/EiJ	MGP_WSBEiJ_G0006800	lincRNA gene	Chr6:23160599-23207555 (+)

Homology

• Gene Tree
  Gm20756
  

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000106799 (Evidence)
• NCBI Gene
  626904

Representative Sequences			Length	Strain/Species
genomic	626904	NCBI Gene Model | MGI Sequence Detail	45802	C57BL/6J
transcript	NR_040771	RefSeq | MGI Sequence Detail	1565	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

TSS for Gm20756:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr1795	Chr6:25931379-25931419 (+)	-26 bp