Gm21060 Gene Detail

Summary

• Symbol
  Gm21060
• Name
  predicted gene, 21060

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:5434415
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:61285027-61301942 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434415	protein coding gene	Chr19:61285027-61301942 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0025033	protein coding gene	Chr19:61042102-61042384 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0019946	protein coding gene	Chr11:130298361-130298528 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0023826	protein coding gene	Chr18:91086721-91099975 (+)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0024539	protein coding gene	Chr18:91916824-91916991 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0025139	protein coding gene	Chr19:65713368-65713533 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0023572	protein coding gene	Chr18:87742123-87754994 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0023379	protein coding gene	Chr18:90632410-90645056 (+)
WSB/EiJ	MGP_WSBEiJ_G0023889	protein coding gene	Chr18:90675061-90688325 (+)

Homology

• Gene Tree
  Gm21060
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  11

• Ensembl
  ENSMUSG00000095993 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095993	Ensembl Gene Model | MGI Sequence Detail	16916	C57BL/6J
transcript	ENSMUST00000179346	Ensembl | MGI Sequence Detail	1150	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9