Gm21149 Gene Detail

Summary

• Symbol
  Gm21149
• Name
  predicted gene, 21149

• Feature Type
  protein coding gene
• IDs
  MGI:5434504
  NCBI Gene: 100861702
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:15676701-15681521 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  57 from dbSNP Build 142
• Strain Annotations
  6

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434504	protein coding gene	Chr5:15676701-15681534 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0017064	protein coding gene	Chr10:19863110-19868198 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0029215	protein coding gene	Chr5:14919759-14923521 (+)
BALB/cJ	MGP_BALBcJ_G0017004	protein coding gene	Chr10:19171170-19176254 (-)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0016935	protein coding gene	Chr10:46370126-46372356 (+)
DBA/2J	MGP_DBA2J_G0029118	protein coding gene	Chr5:14587912-14594727 (+)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  Gm21149 stringent orthology
  1 mouse;4 rat
  
• Gene Tree
  Gm21149
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm21149
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS89880.1

• Ensembl
  ENSMUSG00000099762 (Evidence)
• NCBI Gene
  100861702

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099762	Ensembl Gene Model | MGI Sequence Detail	4821	C57BL/6J
transcript	ENSMUST00000197995	Ensembl | MGI Sequence Detail	1212	Not Applicable
polypeptide	ENSMUSP00000143356	Ensembl | MGI Sequence Detail	255	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR006907 Disks large homolog 5, N-terminal

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:155721 Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI), Consensus CDS project. Database Download. 2010;