Gm21680 Gene Detail

Summary

• Symbol
  Gm21680
• Name
  predicted gene, 21680

• Feature Type
  protein coding gene
• IDs
  MGI:5435035
  NCBI Gene: 100862368
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:26171909-26177643 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5435035	protein coding gene	Chr5:26170959-26177661 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  Gm21680 stringent orthology
  1 mouse;4 rat
  
• Gene Tree
  Gm21680
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Radiation induced
  2
• Spontaneous
  1
• Genomic Mutations
  5 involving Gm21680
• Find Mice (IMSR)
  5 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000106627 (Evidence)
• NCBI Gene
  100862368

Representative Sequences			Length	Strain/Species
genomic	100862368	NCBI Gene Model | MGI Sequence Detail	5735	C57BL/6J
transcript	NM_001378644	RefSeq | MGI Sequence Detail	2007	ZRU/MplStud
polypeptide	NP_001365573	RefSeq | MGI Sequence Detail	267	ZRU/MplStud

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR006907 Disks large homolog 5, N-terminal

References

• Summaries
  All 15

  Diseases 1

  Phenotypes 11
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:119563 Alt B, et al., Arteries define the position of the thyroid gland during its developmental relocalisation. Development. 2006 Oct;133(19):3797-804