Gm21925 Pseudogene Detail

Summary

• Symbol
  Gm21925
• Name
  predicted gene, 21925

• Feature Type
  pseudogene
• IDs
  MGI:5439377
  NCBI Gene: 100416055
• Alliance
  gene page
• Transcription Start Sites
  13 TSS

Location &
Maps

• Sequence Map
  Chr7:27792737-27846940 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1268 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5439377	pseudogene	Chr7:27792737-27846940 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  100416055

Representative Sequences			Length	Strain/Species
genomic	100416055	NCBI Gene Model | MGI Sequence Detail	54204	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm21925:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr65360	Chr7:27791221-27791242 (+)	-1,505 bp
Tssr65361	Chr7:27793005-27793031 (+)	281 bp
Tssr65362	Chr7:27800679-27800688 (+)	7,947 bp
Tssr65363	Chr7:27800720-27800732 (+)	7,989 bp
Tssr65364	Chr7:27803360-27803371 (+)	10,629 bp
Tssr65365	Chr7:27804198-27804205 (+)	11,465 bp
Tssr2156	Chr7:27806744-27806753 (+)	14,012 bp
Tssr65366	Chr7:27815007-27815014 (+)	22,274 bp
Tssr65367	Chr7:27815022-27815031 (+)	22,290 bp
Tssr65368	Chr7:27815047-27815052 (+)	22,313 bp
Tssr65369	Chr7:27816808-27816817 (+)	24,076 bp
Tssr65370	Chr7:27816857-27816864 (+)	24,124 bp
Tssr65371	Chr7:27819932-27819974 (+)	27,216 bp