Gm21973 Gene Detail

Summary

• Symbol
  Gm21973
• Name
  predicted gene 21973

• Feature Type
  protein coding gene
• IDs
  MGI:5439442
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr15:10325466-10373835 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic

Strain
Comparison

• SNPs within 2kb
  1112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5439442	protein coding gene	Chr15:10325466-10373835 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0021719	protein coding gene	Chr15:7450914-7498352 (+)
A/J	MGP_AJ_G0021679	protein coding gene	Chr15:7268965-7310357 (+)
AKR/J	MGP_AKRJ_G0021657	protein coding gene	Chr15:7429908-7475937 (+)
BALB/cJ	MGP_BALBcJ_G0021686	protein coding gene	Chr15:7173057-7222370 (+)
C3H/HeJ	MGP_C3HHeJ_G0021462	protein coding gene	Chr15:7374893-7423305 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0022125	protein coding gene	Chr15:7740930-7783104 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0019662	protein coding gene	Chr15:6743899-6785941 (+)
CAST/EiJ	MGP_CASTEiJ_G0020978	protein coding gene	Chr15:7438335-7477908 (+)
CBA/J	MGP_CBAJ_G0021431	protein coding gene	Chr15:7895300-7964530 (+)
DBA/2J	MGP_DBA2J_G0021555	protein coding gene	Chr15:7126148-7177210 (+)
FVB/NJ	MGP_FVBNJ_G0021533	protein coding gene	Chr15:6992987-7039312 (+)
LP/J	MGP_LPJ_G0021623	protein coding gene	Chr15:7355100-7403328 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0021558	protein coding gene	Chr15:8206983-8258144 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0022148	protein coding gene	Chr15:7390876-7432975 (+)
PWK/PhJ	MGP_PWKPhJ_G0020721	protein coding gene	Chr15:7291706-7333483 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0020559	protein coding gene	Chr15:7353056-7400122 (+)
WSB/EiJ	MGP_WSBEiJ_G0021034	protein coding gene	Chr15:7405130-7451445 (+)

Homology

• Gene Tree
  Gm21973
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000094814 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094814	Ensembl Gene Model | MGI Sequence Detail	48370	C57BL/6J
transcript	ENSMUST00000157020	Ensembl | MGI Sequence Detail	358	Not Applicable
polypeptide	ENSMUSP00000120297	Ensembl | MGI Sequence Detail	68	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 3
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm21973:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr130687	Chr15:10346570-10346577 (+)	21,108 bp
Tssr130688	Chr15:10346819-10346842 (+)	21,365 bp